RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 C22orf31O95567 290 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 FOSL2P15408 326 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 PPP2R5CQ13362 524 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 MKRN4PQ13434 485 aaPredicted RBP17.5■□□□□ 0.39
MED28-204ENST00000506409 MYOCDQ8IZQ8 938 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 NME8Q8N427 588 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 NRBP2Q9NSY0 501 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 VAV3Q9UKW4 847 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 PTPRSQ13332 1948 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 MICAL3Q7RTP6 2002 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 SIP14410 1827 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 WDR81Q562E7 1941 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 FAM117BQ6P1L5 589 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 TSHZ1Q6ZSZ6 1077 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 KIAA0319LQ8IZA0 1049 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 METTL13Q8N6R0 699 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 HAS1Q92839 578 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 CELF4Q9BZC1 486 aaKnown RBP17.49■□□□□ 0.39
MED28-204ENST00000506409 PRDM12Q9H4Q4 367 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 SQORQ9Y6N5 450 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 CHD9Q3L8U1 2897 aa17.49■□□□□ 0.39
MED28-204ENST00000506409 MYO9BQ13459 2157 aa17.48■□□□□ 0.39
MED28-204ENST00000506409 MAGEB2O15479 319 aa17.48■□□□□ 0.39
MED28-204ENST00000506409 BAG4O95429 457 aaKnown RBP17.48■□□□□ 0.39
MED28-204ENST00000506409 USP38Q8NB14 1042 aa17.48■□□□□ 0.39
MED28-204ENST00000506409 BANK1Q8NDB2 785 aa17.48■□□□□ 0.39
MED28-204ENST00000506409 FBXO18Q8NFZ0 1043 aa17.48■□□□□ 0.39
MED28-204ENST00000506409 GAS2L1Q99501 681 aaPredicted RBP17.48■□□□□ 0.39
MED28-204ENST00000506409 RAD9AQ99638 391 aa17.48■□□□□ 0.39
MED28-204ENST00000506409 SEPT9Q9UHD8 586 aaPredicted RBP17.48■□□□□ 0.39
MED28-204ENST00000506409 GINS2Q9Y248 185 aa17.48■□□□□ 0.39
MED28-204ENST00000506409 KDM3AQ9Y4C1 1321 aa17.47■□□□□ 0.39
MED28-204ENST00000506409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.47■□□□□ 0.39
MED28-204ENST00000506409 EML1O00423 815 aa17.47■□□□□ 0.39
MED28-204ENST00000506409 CD52P31358 61 aa17.47■□□□□ 0.39
MED28-204ENST00000506409 PSMC5P62195 406 aa17.47■□□□□ 0.39
MED28-204ENST00000506409 TAP1Q03518 808 aa17.47■□□□□ 0.39
MED28-204ENST00000506409 XKR3Q5GH77 459 aa17.47■□□□□ 0.39
MED28-204ENST00000506409 TMX3Q96JJ7 454 aa17.47■□□□□ 0.39
MED28-204ENST00000506409 AGO3Q9H9G7 860 aaKnown RBP17.47■□□□□ 0.39
MED28-204ENST00000506409 LCHNA4D1U4 455 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 WNT7AO00755 349 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 NEMFO60524 1076 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 CD2BP2O95400 341 aaKnown RBP17.46■□□□□ 0.39
MED28-204ENST00000506409 TMOD1P28289 359 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 MCM2P49736 904 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 CLCN3P51790 818 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 TBC1D8BQ0IIM8 1120 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 PAK2Q13177 524 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 GNL2Q13823 731 aaKnown RBP17.46■□□□□ 0.39
MED28-204ENST00000506409 CALCRLQ16602 461 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 NCAPH2Q6IBW4 605 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 EFCAB12Q6NXP0 572 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 MAFAQ8NHW3 353 aaPredicted RBP17.46■□□□□ 0.39
MED28-204ENST00000506409 MAP7D2Q96T17 732 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 FOXP1Q9H334 677 aaPredicted RBP17.46■□□□□ 0.39
MED28-204ENST00000506409 EVPLQ92817 2033 aa17.46■□□□□ 0.39
MED28-204ENST00000506409 CHD7Q9P2D1 2997 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 DKC1O60832 514 aaKnown RBP eCLIP17.45■□□□□ 0.38
MED28-204ENST00000506409 ARHGEF15O94989 841 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 UPP2O95045 317 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 VTNP04004 478 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 ATP2B1P20020 1258 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
MED28-204ENST00000506409 TARBP2Q15633 366 aaKnown RBP17.45■□□□□ 0.38
MED28-204ENST00000506409 KIZQ2M2Z5 673 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 MTERF2Q49AM1 385 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 LRRC71Q8N4P6 559 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 TOP1MTQ969P6 601 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 PPP1R16BQ96T49 567 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 NIFKQ9BYG3 293 aaKnown RBP17.45■□□□□ 0.38
MED28-204ENST00000506409 CERS4Q9HA82 394 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 SUGCTQ9HAC7 445 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 PADI3Q9ULW8 664 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 AKT3Q9Y243 479 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 INSL6Q9Y581 213 aa17.45■□□□□ 0.38
MED28-204ENST00000506409 TMEM150BA6NC51 233 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 STBD1O95210 358 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 P4HBP07237 508 aaKnown RBP17.44■□□□□ 0.38
MED28-204ENST00000506409 MCM7P33993 719 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 HTRA4P83105 476 aaPredicted RBP17.44■□□□□ 0.38
MED28-204ENST00000506409 SPIRE1Q08AE8 756 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 EPHA7Q15375 998 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 LINC01465Q8N7H1 131 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 ARNTL2Q8WYA1 636 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 YME1L1Q96TA2 773 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 FTHL17Q9BXU8 183 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 BACH2Q9BYV9 841 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 CDHR5Q9HBB8 845 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 PCDHA12Q9UN75 941 aa17.44■□□□□ 0.38
MED28-204ENST00000506409 ENPP3O14638 875 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 GPR32O75388 356 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 RPS6KA5O75582 802 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 IGFBP4P22692 258 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 TXKP42681 527 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 CRYBB1P53674 252 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms