RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 FERP16591 822 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 POLR2FP61218 127 aaKnown RBP17.27■□□□□ 0.36
SCLT1-208ENST00000506368 NCALDP61601 193 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 BNIP1Q12981 228 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 TRAF1Q13077 416 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 INF2Q27J81 1249 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 PEX26Q7Z412 305 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 DGKHQ86XP1 1220 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 DDX42Q86XP3 938 aaKnown RBP eCLIP17.27■□□□□ 0.36
SCLT1-208ENST00000506368 METTL13Q8N6R0 699 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 MICAL1Q8TDZ2 1067 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 PLIN2Q99541 437 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 LSM14BQ9BX40 385 aaKnown RBP17.27■□□□□ 0.36
SCLT1-208ENST00000506368 RAB34Q9BZG1 259 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 ZMYND12Q9H0C1 365 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 DDX47Q9H0S4 455 aaKnown RBP17.27■□□□□ 0.36
SCLT1-208ENST00000506368 ARHGEF3Q9NR81 526 aa17.27■□□□□ 0.36
SCLT1-208ENST00000506368 PACSIN2Q9UNF0 486 aaPredicted RBP17.27■□□□□ 0.36
SCLT1-208ENST00000506368 USP15Q9Y4E8 981 aaPredicted RBP17.27■□□□□ 0.36
SCLT1-208ENST00000506368 COL1A1P02452 1464 aaPredicted RBP17.27■□□□□ 0.35
SCLT1-208ENST00000506368 DCDC2CA8MYV0 355 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 CAND2O75155 1236 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 ECM2O94769 699 aaPredicted RBP17.27■□□□□ 0.35
SCLT1-208ENST00000506368 ZBTB7AO95365 584 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 RARAP10276 462 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 SSR1P43307 286 aaKnown RBP17.27■□□□□ 0.35
SCLT1-208ENST00000506368 COPS2P61201 443 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 POU5F1Q01860 360 aaKnown RBP17.27■□□□□ 0.35
SCLT1-208ENST00000506368 RAPGEF1Q13905 1077 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 ZCWPW2Q504Y3 356 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 LRRC34Q8IZ02 419 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 LARP4BQ92615 738 aaKnown RBP17.27■□□□□ 0.35
SCLT1-208ENST00000506368 RAB3IPQ96QF0 476 aaPredicted RBP17.27■□□□□ 0.35
SCLT1-208ENST00000506368 TRIM7Q9C029 511 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 PANK4Q9NVE7 773 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 BARHL2Q9NY43 387 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 ADAMTS1Q9UHI8 967 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 TRMT112Q9UI30 125 aaKnown RBP17.27■□□□□ 0.35
SCLT1-208ENST00000506368 RASAL2Q9UJF2 1139 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.35
SCLT1-208ENST00000506368 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 DIAPH2O60879 1101 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 ZPR1O75312 459 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 GYS1P13807 737 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 ADRA2BP18089 450 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 PRKCIP41743 596 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 PMS2P54278 862 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 RNASE9P60153 205 aaKnown RBP17.26■□□□□ 0.35
SCLT1-208ENST00000506368 PTENP60484 403 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 MKRN3Q13064 507 aaKnown RBP17.26■□□□□ 0.35
SCLT1-208ENST00000506368 NONOQ15233 471 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCLT1-208ENST00000506368 MFN1Q8IWA4 741 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 TPCN2Q8NHX9 752 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 RNF217Q8TC41 542 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 SELENOSQ9BQE4 189 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 AMACRQ9UHK6 382 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 NARFQ9UHQ1 456 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 MYH4Q9Y623 1939 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 A0A1B0GUL6 1792 aa17.26■□□□□ 0.35
SCLT1-208ENST00000506368 NKRFO15226 690 aaKnown RBP eCLIP17.25■□□□□ 0.35
SCLT1-208ENST00000506368 FLT3P36888 993 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 GRM4Q14833 912 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 PDCD2Q16342 344 aaPredicted RBP17.25■□□□□ 0.35
SCLT1-208ENST00000506368 TNFAIP8L3Q5GJ75 292 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 BICDL1Q6ZP65 573 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 MDM1Q8TC05 714 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 KLHL29Q96CT2 875 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ELAC2Q9BQ52 826 aaKnown RBP17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ROPN1BQ9BZX4 212 aaPredicted RBP17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ROPN1Q9HAT0 212 aaPredicted RBP17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ZFATQ9P243 1243 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 L3MBTL1Q9Y468 752 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.25■□□□□ 0.35
SCLT1-208ENST00000506368 HSPA6P17066 643 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 GNA11P29992 359 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ALDH5A1P51649 535 aaPredicted RBP17.25■□□□□ 0.35
SCLT1-208ENST00000506368 MRPS35P82673 323 aaKnown RBP17.25■□□□□ 0.35
SCLT1-208ENST00000506368 CCDC15Q0P6D6 951 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 SBK1Q52WX2 424 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 TRIM59Q8IWR1 403 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 HES6Q96HZ4 224 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 CDK5RAP3Q96JB5 506 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ADAM7Q9H2U9 754 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ECT2Q9H8V3 914 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ARPP21Q9UBL0 812 aaPredicted RBP17.25■□□□□ 0.35
SCLT1-208ENST00000506368 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ATP8A1Q9Y2Q0 1164 aa17.25■□□□□ 0.35
SCLT1-208ENST00000506368 ERVV-1B6SEH8 477 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 TTI1O43156 1089 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ATP5HO75947 161 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 VIMP08670 466 aaKnown RBP17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ATP5DP30049 168 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 MSH2P43246 934 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCLT1-208ENST00000506368 INHBEP58166 350 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 TMEM266Q2M3C6 531 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ANKRD20A2Q5SQ80 823 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms