RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 BRDTQ58F21 947 aaPredicted RBP8.03□□□□□ -1.12
NUP54-204ENST00000506098 NT5DC1Q5TFE4 455 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 CCSAPQ6IQ19 270 aaPredicted RBP8.03□□□□□ -1.12
NUP54-204ENST00000506098 CAVIN1Q6NZI2 390 aaKnown RBP8.03□□□□□ -1.12
NUP54-204ENST00000506098 ANO5Q75V66 913 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 OTUD6AQ7L8S5 288 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 RASSF8Q8NHQ8 419 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 PIGOQ8TEQ8 1089 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 SH3TC2Q8TF17 1288 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 BBXQ8WY36 941 aaPredicted RBP8.03□□□□□ -1.12
NUP54-204ENST00000506098 LENG1Q96BZ8 264 aaPredicted RBP8.03□□□□□ -1.12
NUP54-204ENST00000506098 FAM167AQ96KS9 214 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 CEP89Q96ST8 783 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 SPC25Q9HBM1 224 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 PAK6Q9NQU5 681 aaPredicted RBP8.03□□□□□ -1.12
NUP54-204ENST00000506098 PDLIM7Q9NR12 457 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 NRBP2Q9NSY0 501 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 ERAP1Q9NZ08 941 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 KCND2Q9NZV8 630 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 HOOK1Q9UJC3 728 aaKnown RBP8.03□□□□□ -1.12
NUP54-204ENST00000506098 SCN5AQ14524 2016 aa8.03□□□□□ -1.12
NUP54-204ENST00000506098 DNAH12Q6ZR08 3092 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 BRCA2P51587 3418 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 MYMKA6NI61 221 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 H3BRB1 525 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 GTPBP6O43824 516 aaPredicted RBP8.02□□□□□ -1.13
NUP54-204ENST00000506098 ZEB2O60315 1214 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 HBP1O60381 514 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 LETM1O95202 739 aaPredicted RBP8.02□□□□□ -1.13
NUP54-204ENST00000506098 F2P00734 622 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 CAPN2P17655 700 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 CYP11B2P19099 503 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 GUCY2CP25092 1073 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 AFMP43652 599 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 IRX5P78411 483 aaPredicted RBP8.02□□□□□ -1.13
NUP54-204ENST00000506098 PURAQ00577 322 aaKnown RBP8.02□□□□□ -1.13
NUP54-204ENST00000506098 DPYDQ12882 1025 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 POSTNQ15063 836 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 ARSHQ5FYA8 562 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 UTP14CQ5TAP6 766 aaKnown RBP8.02□□□□□ -1.13
NUP54-204ENST00000506098 RINT1Q6NUQ1 792 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 C1orf186Q6ZWK4 172 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 PCSK9Q8NBP7 692 aaKnown RBP8.02□□□□□ -1.13
NUP54-204ENST00000506098 ATP8B4Q8TF62 1192 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 KAT2BQ92831 832 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 GLG1Q92896 1179 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 ARMC5Q96C12 935 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 DNAJC19Q96DA6 116 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 TSEN34Q9BSV6 310 aaKnown RBP8.02□□□□□ -1.13
NUP54-204ENST00000506098 TIPINQ9BVW5 301 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 TRIM9Q9C026 710 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.02□□□□□ -1.13
NUP54-204ENST00000506098 BHMT2Q9H2M3 363 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 RNPEPQ9H4A4 650 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 TUT1Q9H6E5 874 aaKnown RBP8.02□□□□□ -1.13
NUP54-204ENST00000506098 XPNPEP3Q9NQH7 507 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 KIAA1468Q9P260 1216 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 TUBE1Q9UJT0 475 aa8.02□□□□□ -1.13
NUP54-204ENST00000506098 ZNF215Q9UL58 517 aaPredicted RBP8.02□□□□□ -1.13
NUP54-204ENST00000506098 TDRD15B5MCY1 1934 aaKnown RBP8.01□□□□□ -1.13
NUP54-204ENST00000506098 RALGAPA2Q2PPJ7 1873 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 A0A087WWV3 80 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 IGKV6-21A0A0C4DH24 114 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 PVALEFA0A1B0GWK0 134 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 FRMD3A2A2Y4 597 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 MYADML2A6NDP7 307 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 ZBTB42B2RXF5 422 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 KLRC4O43908 158 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 PGK1P00558 417 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 C6orf222P0C671 652 aaPredicted RBP8.01□□□□□ -1.13
NUP54-204ENST00000506098 PRR29P0C7W0 189 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 ZNF286BP0CG31 522 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 CCL5P13501 91 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 HOXC8P31273 242 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 BEX3Q00994 111 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 EHHADHQ08426 723 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 PNOCQ13519 176 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 CUL4BQ13620 913 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 GIT2Q14161 759 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 LRRC41Q15345 812 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 MTFR1Q15390 333 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 CAMK4Q16566 473 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 XKR9Q5GH70 373 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 ZNF484Q5JVG2 852 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 GNASQ5JWF2 1037 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 RNF180Q86T96 592 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 TRIM50Q86XT4 487 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 EXOC8Q8IYI6 725 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 GRAMD1CQ8IYS0 662 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 TET1Q8NFU7 2136 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 DDX12PQ92771 950 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 STAMQ92783 540 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 ZNF333Q96JL9 665 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 GSDMAQ96QA5 445 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 MTG1Q9BT17 334 aaPredicted RBP8.01□□□□□ -1.13
NUP54-204ENST00000506098 KATNAL1Q9BW62 490 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 UNC93B1Q9H1C4 597 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 DHX33Q9H6R0 707 aaKnown RBP8.01□□□□□ -1.13
NUP54-204ENST00000506098 CYP26B1Q9NR63 512 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 ODF2LQ9ULJ1 636 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms