RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	ABI1	Q8IZP0	508 aa		18.53	■□□□□ 0.56
DDR1-256	ENST00000505066	PRUNE2	Q8WUY3	3088 aa		18.53	■□□□□ 0.56
DDR1-256	ENST00000505066	IGFLR1	Q9H665	355 aa		18.53	■□□□□ 0.56
DDR1-256	ENST00000505066	ATP6V0A4	Q9HBG4	840 aa		18.53	■□□□□ 0.56
DDR1-256	ENST00000505066	IGKV6D-21	A0A0A0MT36	114 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	HOXA2	O43364	376 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	GAS7	O60861	476 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	MMP1	P03956	469 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	SRGAP2B	P0DMP2	458 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	NDUFV1	P49821	464 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	CRYBB1	P53674	252 aa	Predicted RBP	18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	SSRP1	Q08945	709 aa	Known RBP	18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	SLC24A5	Q71RS6	500 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	NEK9	Q8TD19	979 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	ZNF689	Q96CS4	500 aa	Predicted RBP	18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	ZBTB10	Q96DT7	871 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	SH3GLB2	Q9NR46	395 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	GABBR1	Q9UBS5	961 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	AKT3	Q9Y243	479 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	SNX14	Q9Y5W7	946 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	CYP46A1	Q9Y6A2	500 aa		18.52	■□□□□ 0.56
DDR1-256	ENST00000505066	EYS	Q5T1H1	3165 aa		18.52	■□□□□ 0.55
DDR1-256	ENST00000505066	GRM6	O15303	877 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	CCNE2	O96020	404 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	XBP1	P17861	261 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	SFN	P31947	248 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	USP11	P51784	963 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	JAK3	P52333	1124 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	TMEM266	Q2M3C6	531 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	PHKB	Q93100	1093 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	ADAM2	Q99965	735 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	TEKT3	Q9BXF9	490 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	EPHX3	Q9H6B9	360 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	ALG13	Q9NP73	1137 aa	Known RBP	18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	PUF60	Q9UHX1	559 aa	Known RBP	18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	PLAGL2	Q9UPG8	496 aa		18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	MRPL42	Q9Y6G3	142 aa	Known RBP	18.51	■□□□□ 0.55
DDR1-256	ENST00000505066	EPB41L2	O43491	1005 aa	Known RBP	18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	CPA1	P15085	419 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	IFNAR1	P17181	557 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	DNM2	P50570	870 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	CDC42EP1	Q00587	391 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	BMS1	Q14692	1282 aa	Known RBP	18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	KIZ	Q2M2Z5	673 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	KIAA0319L	Q8IZA0	1049 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	FBXL16	Q8N461	479 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	UIMC1	Q96RL1	719 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	RIT2	Q99578	217 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	ST3GAL5	Q9UNP4	418 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	MAFB	Q9Y5Q3	323 aa	Predicted RBP	18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	COL4A6	Q14031	1691 aa		18.5	■□□□□ 0.55
DDR1-256	ENST00000505066	IGLV3-22	A0A075B6J6	115 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	TBKBP1	A7MCY6	615 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	PI4K2B	G5E9Z4	385 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	GPR37L1	O60883	481 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	CDKL5	O76039	1030 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	IL9	P15248	144 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	CCT2	P78371	535 aa	Known RBP	18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	UBE3A	Q05086	875 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	LRCH2	Q5VUJ6	765 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	SKAP1	Q86WV1	359 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	THNSL1	Q8IYQ7	743 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	KCNB2	Q92953	911 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	LRFN3	Q9BTN0	628 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	DISC1	Q9NRI5	854 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	RGS18	Q9NS28	235 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	CD207	Q9UJ71	328 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	NOC2L	Q9Y3T9	749 aa	Known RBP	18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	VCAN	P13611	3396 aa		18.49	■□□□□ 0.55
DDR1-256	ENST00000505066	DHX15	O43143	795 aa	Known RBP	18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	CHMP2A	O43633	222 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	MARCH6	O60337	910 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	PPFIA3	O75145	1194 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	CIITA	P33076	1130 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	TBC1D8B	Q0IIM8	1120 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	GALNT17	Q6IS24	598 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	PDE12	Q6L8Q7	609 aa	Known RBP	18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	EFCAB12	Q6NXP0	572 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	RUFY3	Q7L099	469 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	FAM177A1	Q8N128	213 aa	Predicted RBP	18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	KLHL23	Q8NBE8	558 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	POF1B	Q8WVV4	589 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	PPP1R16B	Q96T49	567 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	OSMR	Q99650	979 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	ERVK-5	Q9HDB9	667 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	VPS54	Q9P1Q0	977 aa		18.48	■□□□□ 0.55
DDR1-256	ENST00000505066	NCOR1	O75376	2440 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	DCX	O43602	365 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	DKC1	O60832	514 aa	Known RBP eCLIP	18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	DEXI	O95424	95 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	C22orf31	O95567	290 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	OAT	P04181	439 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	LAG3	P18627	525 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	PDIA3	P30101	505 aa	Known RBP	18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	KRT17	Q04695	432 aa		18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	SMAD4	Q13485	552 aa	Known RBP	18.47	■□□□□ 0.55
DDR1-256	ENST00000505066	CLUL1	Q15846	466 aa		18.47	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms