RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 MAPTP10636 758 aaKnown RBP9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZNF76P36508 570 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 FAAP100Q0VG06 881 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 HAUS3Q68CZ6 603 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 GDF6Q6KF10 455 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 MTHFD1LQ6UB35 978 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 MIER3Q7Z3K6 550 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 ATP6V0A1Q93050 837 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 NT5C3AQ9H0P0 336 aa9.29□□□□□ -0.92
CDC42SE2-208ENST00000505065 PP2D1A8MPX8 630 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 SARSP49591 514 aaKnown RBP9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 LRRC26Q2I0M4 334 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 LMBR1Q8WVP7 490 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 C7orf25Q9BPX7 421 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZNF286BP0CG31 522 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 TXKP42681 527 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 PSMC6P62333 389 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 FAM187BQ17R55 369 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 FOXR2Q6PJQ5 311 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 WNT8BQ93098 351 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 CLIC6Q96NY7 704 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 PYM1Q9BRP8 204 aaKnown RBP9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 TRAIPQ9BWF2 469 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 MLXIPQ9HAP2 919 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 CYP26B1Q9NR63 512 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 GABBR1Q9UBS5 961 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 KLRC4O43908 158 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 YWHABP31946 246 aaKnown RBP9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 TMEM266Q2M3C6 531 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 NBPF20Q3BBV1 942 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 RASIP1Q5U651 963 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 MCTP1Q6DN14 999 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 EXOC8Q8IYI6 725 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 NME8Q8N427 588 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 EPSTI1Q96J88 318 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 TNMDQ9H2S6 317 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 LRWD1Q9UFC0 647 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 EN2P19622 333 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 ITGA7Q13683 1181 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 NACC1Q96RE7 527 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 RAB34Q9BZG1 259 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 RGL1Q9NZL6 768 aa9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 ZNF215Q9UL58 517 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE2-208ENST00000505065 B4GALT4O60513 344 aa9.27□□□□□ -0.92
CDC42SE2-208ENST00000505065 SWSAP1Q6NVH7 229 aa9.27□□□□□ -0.92
CDC42SE2-208ENST00000505065 EPM2AIP1Q7L775 607 aaPredicted RBP9.27□□□□□ -0.92
CDC42SE2-208ENST00000505065 POTEB3A0JP26 581 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 GRIK4Q16099 956 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 POTEBQ6S5H4 581 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 CABP7Q86V35 215 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 SENP6Q9GZR1 1112 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 BACH1O14867 736 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 NCKAP1LP55160 1127 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 KIAA0753Q2KHM9 967 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 TRIM50Q86XT4 487 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 ZC3H3Q8IXZ2 948 aaKnown RBP9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 ERMNQ8TAM6 284 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 C17orf75Q9HAS0 396 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 ODF2LQ9ULJ1 636 aa9.27□□□□□ -0.93
CDC42SE2-208ENST00000505065 VWA3AA6NCI4 1184 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 KBTBD13C9JR72 458 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 INPPL1O15357 1258 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 CYP11B2P19099 503 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 GNASQ5JWF2 1037 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 PPP4R3CPQ6ZMV5 832 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 BANK1Q8NDB2 785 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 SPC25Q9HBM1 224 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 MAGEB2O15479 319 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 PIGRP01833 764 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 C6orf222P0C671 652 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 PFKFB1P16118 471 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 PLCG1P19174 1290 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 PCBP1Q15365 356 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 RINT1Q6NUQ1 792 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 RUFY4Q6ZNE9 571 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 KIAA0319LQ8IZA0 1049 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 SPATA32Q96LK8 384 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 NOC4LQ9BVI4 516 aaKnown RBP9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 HDAC6Q9UBN7 1215 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 CITO14578 2027 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 SLFN14P0C7P3 912 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 RFC2P35250 354 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 UBE2HP62256 183 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 AMHR2Q16671 573 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 BMT2Q1RMZ1 405 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 NCAPH2Q6IBW4 605 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 POTEGQ6S5H5 508 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 CXCL17Q6UXB2 119 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 CAGE1Q8TC20 777 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 SPIRE2Q8WWL2 714 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 TFIP11Q9UBB9 837 aaKnown RBP9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 PLXNA4Q9HCM2 1894 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 ABLIM1O14639 778 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 INSRRP14616 1297 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 SPRYD3Q8NCJ5 442 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 PATJQ8NI35 1801 aa9.26□□□□□ -0.93
CDC42SE2-208ENST00000505065 MKI67P46013 3256 aaKnown RBP9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 ZBTB39O15060 712 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 DGAT1O75907 488 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 ADRB2P07550 413 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms