RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 CHD1LQ86WJ1 897 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 RAB11FIP4Q86YS3 637 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 CRIPAKQ8N1N5 446 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 COLGALT1Q8NBJ5 622 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 KREMEN2Q8NCW0 462 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 CTCFLQ8NI51 663 aaPredicted RBP7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 ATP8B4Q8TF62 1192 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 SUSD6Q92537 303 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 CDHR1Q96JP9 859 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 RIPOR3Q96MK2 946 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 PCYT2Q99447 389 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 TCF25Q9BQ70 676 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 SMOC2Q9H3U7 446 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 PLXNA3P51805 1871 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 hCG_1642624A0A1W2PR95 340 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 FSD2A1L4K1 749 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 DDX39AO00148 427 aaKnown RBP7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 PIK3CDO00329 1044 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 RPS6KA5O75582 802 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 PLEKHA8P1O95397 391 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 BRD1O95696 1058 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 RPLP2P05387 115 aaKnown RBP7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 CYP21A2P08686 494 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 C7P10643 843 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 RXRAP19793 462 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 PBX3P40426 434 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 SYCE2Q6PIF2 218 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 CMTR1Q8N1G2 835 aaKnown RBP7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 TMEM105Q8N8V8 129 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 NCOA7Q8NI08 942 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 SLC39A7Q92504 469 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 CDCA3Q99618 268 aaPredicted RBP7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 ADAM2Q99965 735 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 SDF4Q9BRK5 362 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 S1PR5Q9H228 398 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 MFSD1Q9H3U5 465 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 PSTPIP2Q9H939 334 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 CDHR5Q9HBB8 845 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 ERVK-5Q9HDB9 667 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 JADE2Q9NQC1 790 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 RTN4Q9NQC3 1192 aaKnown RBP7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 TYW1Q9NV66 732 aaKnown RBP7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 SLC9A2Q9UBY0 812 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 NOC2LQ9Y3T9 749 aaKnown RBP7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 PCDHA2Q9Y5H9 948 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 UBIAD1Q9Y5Z9 338 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 TAF6LQ9Y6J9 622 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 SQORQ9Y6N5 450 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 LOXHD1Q8IVV2 1947 aa7.89□□□□□ -1.15
NPIPB3-203ENST00000504841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 SMIM35A0A1B0GVV1 85 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 PRR23AA6NEV1 266 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 HIDE1A8MVS5 230 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 C2CD4DB7Z1M9 353 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 BACH1O14867 736 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 FSCN2O14926 492 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 ASGR2P07307 311 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 WEE2P0C1S8 567 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 LAG3P18627 525 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 KLRC1P26715 233 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 PDE4AP27815 886 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 KIF5BP33176 963 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 STAT5BP51692 787 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 ANTXR2P58335 489 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 ACTR2P61160 394 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 MTMR3Q13615 1198 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 PDE12Q6L8Q7 609 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 MTHFD1LQ6UB35 978 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 NFXL1Q6ZNB6 911 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 TRMT1LQ7Z2T5 733 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 FRMD5Q7Z6J6 570 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 ZNF654Q8IZM8 581 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 RNF169Q8NCN4 708 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 TMEM40Q8WWA1 233 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 MRPS27Q92552 414 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 TNPO1Q92973 898 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 PGBD1Q96JS3 809 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 OSMRQ99650 979 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 SPZ1Q9BXG8 430 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 POMKQ9H5K3 350 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 ATP6V0A4Q9HBG4 840 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 C1orf112Q9NSG2 853 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 PUF60Q9UHX1 559 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 PCDHA6Q9UN73 950 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 SORCS3Q9UPU3 1222 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 NR2E1Q9Y466 385 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 PCDHA8Q9Y5H6 950 aa7.88□□□□□ -1.15
NPIPB3-203ENST00000504841 FNDC1Q4ZHG4 1894 aaPredicted RBP7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 KDM3AQ9Y4C1 1321 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 C9IYK1 514 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 E7EWF7 191 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 DDAH1O94760 285 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 ARP10275 920 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 FOXK2Q01167 660 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 PTH1RQ03431 593 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 KIZQ2M2Z5 673 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 TPRNQ4KMQ1 711 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 CES5AQ6NT32 575 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 SLC24A5Q71RS6 500 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 TMC7Q7Z402 723 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms