RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 hCG_1984214I3L0E3 225 aa14.97□□□□□ -0.01
DDX41-204ENST00000504807 MAFGO15525 162 aa14.97□□□□□ -0.01
DDX41-204ENST00000504807 CAND2O75155 1236 aa14.97□□□□□ -0.01
DDX41-204ENST00000504807 FOSP01100 380 aaPredicted RBP14.97□□□□□ -0.01
DDX41-204ENST00000504807 TMEM62Q0P6H9 643 aa14.97□□□□□ -0.01
DDX41-204ENST00000504807 AP3B2Q13367 1082 aa14.97□□□□□ -0.01
DDX41-204ENST00000504807 SMAD4Q13485 552 aaKnown RBP14.97□□□□□ -0.01
DDX41-204ENST00000504807 ABHD15Q6UXT9 468 aa14.97□□□□□ -0.01
DDX41-204ENST00000504807 CCDC60Q8IWA6 550 aaPredicted RBP14.97□□□□□ -0.01
DDX41-204ENST00000504807 ZNF713Q8N859 430 aaPredicted RBP14.97□□□□□ -0.01
DDX41-204ENST00000504807 TOP1MTQ969P6 601 aa14.97□□□□□ -0.01
DDX41-204ENST00000504807 AIFM3Q96NN9 605 aa14.97□□□□□ -0.01
DDX41-204ENST00000504807 SMARCAD1Q9H4L7 1026 aa14.97□□□□□ -0.01
DDX41-204ENST00000504807 UPP2O95045 317 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 CYP3A4P08684 503 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 GNAT1P11488 350 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 FGD1P98174 961 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 NPY5RQ15761 445 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 CTC1Q2NKJ3 1217 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 FBXO47Q5MNV8 452 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 RUFY3Q7L099 469 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 RTN4RL1Q86UN2 441 aaPredicted RBP14.96□□□□□ -0.01
DDX41-204ENST00000504807 PLA2G4DQ86XP0 818 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 SEPT8Q92599 483 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 GJA10Q969M2 543 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 SLC26A6Q9BXS9 759 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 IFIH1Q9BYX4 1025 aaKnown RBP14.96□□□□□ -0.01
DDX41-204ENST00000504807 FAM49AQ9H0Q0 323 aaPredicted RBP14.96□□□□□ -0.01
DDX41-204ENST00000504807 CDY2AQ9Y6F7 541 aa14.96□□□□□ -0.01
DDX41-204ENST00000504807 KMT2EQ8IZD2 1858 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 NCK2O43639 380 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 EFCAB14O75071 495 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 CSPG5O95196 566 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 AMHP03971 560 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 IFNAR1P17181 557 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 STAT5BP51692 787 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 SIGLEC14Q08ET2 396 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 NIPA1Q7RTP0 329 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 IGFLR1Q9H665 355 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 CDHR5Q9HBB8 845 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 RC3H2Q9HBD1 1191 aaKnown RBP14.95□□□□□ -0.02
DDX41-204ENST00000504807 PLXNA3P51805 1871 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 DNAH14Q0VDD8 3507 aa14.95□□□□□ -0.02
DDX41-204ENST00000504807 ATG2AQ2TAZ0 1938 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 TBX10O75333 385 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 REC8O95072 547 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 CD52P31358 61 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 GTF2F1P35269 517 aaKnown RBP eCLIP14.94□□□□□ -0.02
DDX41-204ENST00000504807 MRPS6P82932 125 aaKnown RBP14.94□□□□□ -0.02
DDX41-204ENST00000504807 HYAL1Q12794 435 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 TAF2Q6P1X5 1199 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 PLPPR4Q7Z2D5 763 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 TMEM192Q8IY95 271 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 ADSSL1Q8N142 457 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 REXO1Q8N1G1 1221 aaKnown RBP14.94□□□□□ -0.02
DDX41-204ENST00000504807 CRIPAKQ8N1N5 446 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 TMEM40Q8WWA1 233 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 ASIC4Q96FT7 647 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 SAMD11Q96NU1 681 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 SDF4Q9BRK5 362 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 RNF26Q9BY78 433 aaPredicted RBP14.94□□□□□ -0.02
DDX41-204ENST00000504807 CD207Q9UJ71 328 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 KMT2BQ9UMN6 2715 aaPredicted RBP14.94□□□□□ -0.02
DDX41-204ENST00000504807 MYO7AQ13402 2215 aa14.94□□□□□ -0.02
DDX41-204ENST00000504807 CCDC196A0A1B0GTZ2 297 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 M0R2N6 131 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 IPO5O00410 1097 aaKnown RBP14.93□□□□□ -0.02
DDX41-204ENST00000504807 ENPP3O14638 875 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 LINC01565O15544 149 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 STK3Q13188 491 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 MTHFD1LQ6UB35 978 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 YME1L1Q96TA2 773 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 TMX1Q9H3N1 280 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 C6orf50Q9HD87 102 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 GJB4Q9NTQ9 266 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 PCDHA2Q9Y5H9 948 aa14.93□□□□□ -0.02
DDX41-204ENST00000504807 TPRP12270 2363 aaKnown RBP14.92□□□□□ -0.02
DDX41-204ENST00000504807 GALR2O43603 387 aaPredicted RBP14.92□□□□□ -0.02
DDX41-204ENST00000504807 PDGFBP01127 241 aaPredicted RBP14.92□□□□□ -0.02
DDX41-204ENST00000504807 PSMA5P28066 241 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 CIITAP33076 1130 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 ZNF76P36508 570 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 NBL1P41271 181 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 UGCGQ16739 394 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 TMEM266Q2M3C6 531 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 PRR16Q569H4 304 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 SWSAP1Q6NVH7 229 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 TSHZ1Q6ZSZ6 1077 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 FRMD5Q7Z6J6 570 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 TEX2Q8IWB9 1127 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 PPP1R16BQ96T49 567 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 ZNF577Q9BSK1 485 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 AZI2Q9H6S1 392 aa14.92□□□□□ -0.02
DDX41-204ENST00000504807 LOC730098B7Z3J9 87 aa14.91□□□□□ -0.02
DDX41-204ENST00000504807 MSH4O15457 936 aa14.91□□□□□ -0.02
DDX41-204ENST00000504807 ZNF862O60290 1169 aa14.91□□□□□ -0.02
DDX41-204ENST00000504807 MGEA5O60502 916 aa14.91□□□□□ -0.02
DDX41-204ENST00000504807 KLRC1P26715 233 aa14.91□□□□□ -0.02
DDX41-204ENST00000504807 GATMP50440 423 aa14.91□□□□□ -0.02
DDX41-204ENST00000504807 TRMT1LQ7Z2T5 733 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms