RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 PHF19Q5T6S3 580 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 SLFN12LQ6IEE8 588 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 SYDE1Q6ZW31 735 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 STK32CQ86UX6 486 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 CMIPQ8IY22 773 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 KYQ8NBH2 561 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 MAML3Q96JK9 1138 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 ZSWIM3Q96MP5 696 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 CEP89Q96ST8 783 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 ARHGAP20Q9P2F6 1191 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 ZFP69BQ9UJL9 534 aa7.54□□□□□ -1.2
TRAPPC13-206ENST00000504751 ELL2O00472 640 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 IL18BPO95998 194 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 IARSP41252 1262 aaKnown RBP7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 ECE1P42892 770 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 RGS3P49796 1198 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 ROM1Q03395 351 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 SSPNQ14714 243 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 ABCB5Q2M3G0 1257 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 ZBTB41Q5SVQ8 909 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 KANSL1Q7Z3B3 1105 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 LMBR1Q8WVP7 490 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 FAM84AQ96KN4 292 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 CLIC6Q96NY7 704 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 TUBGCP5Q96RT8 1024 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 SMAD5Q99717 465 aaKnown RBP7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 MYL10Q9BUA6 226 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 KLHL42Q9P2K6 505 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 THRAP3Q9Y2W1 955 aaKnown RBP7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 PPP2R3BQ9Y5P8 575 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 IRAK3Q9Y616 596 aa7.53□□□□□ -1.2
TRAPPC13-206ENST00000504751 S100BP04271 92 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 GLRBP48167 497 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 MANFP55145 182 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 IL13RA1P78552 427 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 SMAD4Q13485 552 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 STILQ15468 1287 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 ODR4Q5SWX8 454 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 PRAMEF9Q5VWM5 478 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 KANK2Q63ZY3 851 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 ESPNLQ6ZVH7 1005 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 FAM129CQ86XR2 697 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 TTLL6Q8N841 843 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 CALML6Q8TD86 181 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 ZBTB8AQ96BR9 441 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 WRNIP1Q96S55 665 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 ORAI2Q96SN7 254 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 BTBD2Q9BX70 525 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 OR10A5Q9H207 317 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 CD320Q9NPF0 282 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 KCND1Q9NSA2 647 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 PMF1-BGLAPU3KQ54 211 aa7.52□□□□□ -1.21
TRAPPC13-206ENST00000504751 LOC100996750A0A140TA64 210 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 FZD9O00144 591 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 ALDH1L1O75891 902 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 FARP2O94887 1054 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 PRPF6O94906 941 aaKnown RBP7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 FBXO21O94952 628 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 COL6A1P12109 1028 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 PI3P19957 117 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 SCAND1P57086 179 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 DLX2Q07687 328 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 OGFOD2Q6N063 350 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 KIAA1841Q6NSI8 718 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 TIGD7Q6NT04 549 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 UNQ6494/PRO21346Q6UXR6 183 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 STPG3Q8N7X2 389 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 FNIP1Q8TF40 1166 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 TACO1Q9BSH4 297 aaKnown RBP7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 KRTAP4-6Q9BYQ5 205 aa7.51□□□□□ -1.21
TRAPPC13-206ENST00000504751 MAFO75444 373 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 TSPAN15O95858 294 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 GPR3P46089 330 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 ADCY2Q08462 1091 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 TTF1Q15361 905 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 FSCN1Q16658 493 aaKnown RBP7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 RGL3Q3MIN7 710 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 PRR31Q5SQ13 230 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 ATG14Q6ZNE5 492 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 POU5F2Q8N7G0 328 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 ACAP3Q96P50 834 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 PPP1R16BQ96T49 567 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 RNF114Q9Y508 228 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 TNKSO95271 1327 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 WASHC2AQ641Q2 1341 aa7.5□□□□□ -1.21
TRAPPC13-206ENST00000504751 H2AFYO75367 372 aaKnown RBP7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 MT-CO1P00395 513 aa7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 KNG1P01042 644 aa7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 CLEC2LP0C7M8 214 aa7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 C1QTNF9P0C862 333 aa7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 ENPP1P22413 925 aa7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 APEX1P27695 318 aaKnown RBP7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 NEK2P51955 445 aa7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 ZNF648Q5T619 568 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 FERMT2Q96AC1 680 aa7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 WNT8AQ9H1J5 351 aa7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 METTL14Q9HCE5 456 aaKnown RBP7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 CCM2LQ9NUG4 571 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 SPATA6Q9NWH7 488 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC13-206ENST00000504751 CROTQ9UKG9 612 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms