RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 AGO3Q9H9G7 860 aaKnown RBP28.63■■■□□ 2.17
PVT1-201ENST00000504719 MTCH2Q9Y6C9 303 aa28.63■■■□□ 2.17
PVT1-201ENST00000504719 KDM3AQ9Y4C1 1321 aa28.63■■■□□ 2.17
PVT1-201ENST00000504719 CCDC194A0A1B0GVG4 234 aa28.62■■■□□ 2.17
PVT1-201ENST00000504719 JAK2O60674 1132 aa28.62■■■□□ 2.17
PVT1-201ENST00000504719 UPP2O95045 317 aa28.62■■■□□ 2.17
PVT1-201ENST00000504719 SFNP31947 248 aa28.62■■■□□ 2.17
PVT1-201ENST00000504719 JAK3P52333 1124 aa28.62■■■□□ 2.17
PVT1-201ENST00000504719 CCDC83Q8IWF9 413 aa28.62■■■□□ 2.17
PVT1-201ENST00000504719 KIAA0319LQ8IZA0 1049 aa28.62■■■□□ 2.17
PVT1-201ENST00000504719 PRDM6Q9NQX0 595 aa28.62■■■□□ 2.17
PVT1-201ENST00000504719 TTC3P53804 2025 aa28.62■■■□□ 2.17
PVT1-201ENST00000504719 PRRC2BQ5JSZ5 2229 aaKnown RBP28.61■■■□□ 2.17
PVT1-201ENST00000504719 ENPP3O14638 875 aa28.61■■■□□ 2.17
PVT1-201ENST00000504719 CHMP2AO43633 222 aa28.61■■■□□ 2.17
PVT1-201ENST00000504719 CD52P31358 61 aa28.61■■■□□ 2.17
PVT1-201ENST00000504719 TRMT1LQ7Z2T5 733 aaKnown RBP28.61■■■□□ 2.17
PVT1-201ENST00000504719 ETNPPLQ8TBG4 499 aa28.61■■■□□ 2.17
PVT1-201ENST00000504719 OXER1Q8TDS5 423 aa28.61■■■□□ 2.17
PVT1-201ENST00000504719 FAM167AQ96KS9 214 aa28.61■■■□□ 2.17
PVT1-201ENST00000504719 DDX25Q9UHL0 483 aaKnown RBP28.61■■■□□ 2.17
PVT1-201ENST00000504719 A0A0C4DFX4 3053 aa28.61■■■□□ 2.17
PVT1-201ENST00000504719 TRANK1O15050 2925 aa28.6■■■□□ 2.17
PVT1-201ENST00000504719 GTPBP6O43824 516 aaPredicted RBP28.6■■■□□ 2.17
PVT1-201ENST00000504719 ZNF862O60290 1169 aa28.6■■■□□ 2.17
PVT1-201ENST00000504719 LPXNO60711 386 aa28.6■■■□□ 2.17
PVT1-201ENST00000504719 C22orf31O95567 290 aa28.6■■■□□ 2.17
PVT1-201ENST00000504719 GRB10Q13322 594 aa28.6■■■□□ 2.17
PVT1-201ENST00000504719 LETM2Q2VYF4 491 aa28.6■■■□□ 2.17
PVT1-201ENST00000504719 B3GNT9Q6UX72 402 aa28.6■■■□□ 2.17
PVT1-201ENST00000504719 SH2B1Q9NRF2 756 aaPredicted RBP28.6■■■□□ 2.17
PVT1-201ENST00000504719 CEP131Q9UPN4 1083 aa28.6■■■□□ 2.17
PVT1-201ENST00000504719 COL4A6Q14031 1691 aa28.59■■■□□ 2.17
PVT1-201ENST00000504719 NEK8Q86SG6 692 aa28.59■■■□□ 2.17
PVT1-201ENST00000504719 IL27Q8NEV9 243 aa28.59■■■□□ 2.17
PVT1-201ENST00000504719 RDM1Q8NG50 284 aa28.59■■■□□ 2.17
PVT1-201ENST00000504719 YME1L1Q96TA2 773 aa28.59■■■□□ 2.17
PVT1-201ENST00000504719 NLRC5Q86WI3 1866 aa28.59■■■□□ 2.17
PVT1-201ENST00000504719 SLC37A4O43826 429 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 OATP04181 439 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 UGCGQ16739 394 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 KRT40Q6A162 431 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 PPP4R3AQ6IN85 833 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 PIK3AP1Q6ZUJ8 805 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 MIER3Q7Z3K6 550 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 MICALL1Q8N3F8 863 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 SUGCTQ9HAC7 445 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 NRBP2Q9NSY0 501 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 MTUS1Q9ULD2 1270 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 PADI3Q9ULW8 664 aa28.58■■■□□ 2.17
PVT1-201ENST00000504719 GDPD5Q8WTR4 605 aa28.57■■■□□ 2.16
PVT1-201ENST00000504719 LINC01599Q8WXQ3 324 aa28.57■■■□□ 2.16
PVT1-201ENST00000504719 C17orf80Q9BSJ5 609 aa28.57■■■□□ 2.16
PVT1-201ENST00000504719 FTHL17Q9BXU8 183 aa28.57■■■□□ 2.16
PVT1-201ENST00000504719 CDHR5Q9HBB8 845 aa28.57■■■□□ 2.16
PVT1-201ENST00000504719 MAGEB2O15479 319 aa28.56■■■□□ 2.16
PVT1-201ENST00000504719 CD2BP2O95400 341 aaKnown RBP28.56■■■□□ 2.16
PVT1-201ENST00000504719 GCFC2P16383 781 aaKnown RBP28.56■■■□□ 2.16
PVT1-201ENST00000504719 PRKCEQ02156 737 aa28.56■■■□□ 2.16
PVT1-201ENST00000504719 PAK2Q13177 524 aa28.56■■■□□ 2.16
PVT1-201ENST00000504719 EARS2Q5JPH6 523 aaKnown RBP28.56■■■□□ 2.16
PVT1-201ENST00000504719 RTN4RL1Q86UN2 441 aaPredicted RBP28.56■■■□□ 2.16
PVT1-201ENST00000504719 LLPHQ9BRT6 129 aaKnown RBP28.56■■■□□ 2.16
PVT1-201ENST00000504719 COL25A1Q9BXS0 654 aaPredicted RBP28.56■■■□□ 2.16
PVT1-201ENST00000504719 RALGAPA2Q2PPJ7 1873 aa28.55■■■□□ 2.16
PVT1-201ENST00000504719 KRT2P35908 639 aa28.55■■■□□ 2.16
PVT1-201ENST00000504719 METTL13Q8N6R0 699 aa28.55■■■□□ 2.16
PVT1-201ENST00000504719 LINC01465Q8N7H1 131 aa28.55■■■□□ 2.16
PVT1-201ENST00000504719 KCNMB3Q9NPA1 279 aa28.55■■■□□ 2.16
PVT1-201ENST00000504719 GINS2Q9Y248 185 aa28.55■■■□□ 2.16
PVT1-201ENST00000504719 CCNT1O60563 726 aaKnown RBP28.54■■■□□ 2.16
PVT1-201ENST00000504719 NR5A1Q13285 461 aa28.54■■■□□ 2.16
PVT1-201ENST00000504719 TNFRSF25Q93038 417 aa28.54■■■□□ 2.16
PVT1-201ENST00000504719 FAM20AQ96MK3 541 aa28.54■■■□□ 2.16
PVT1-201ENST00000504719 SAMD11Q96NU1 681 aa28.54■■■□□ 2.16
PVT1-201ENST00000504719 NAP1L4Q99733 375 aaKnown RBP28.54■■■□□ 2.16
PVT1-201ENST00000504719 BRMS1Q9HCU9 246 aa28.54■■■□□ 2.16
PVT1-201ENST00000504719 LMCD1Q9NZU5 365 aa28.54■■■□□ 2.16
PVT1-201ENST00000504719 THEGQ9P2T0 379 aa28.54■■■□□ 2.16
PVT1-201ENST00000504719 NOC2LQ9Y3T9 749 aaKnown RBP28.54■■■□□ 2.16
PVT1-201ENST00000504719 TMEM266Q2M3C6 531 aa28.53■■■□□ 2.16
PVT1-201ENST00000504719 EFCAB12Q6NXP0 572 aa28.53■■■□□ 2.16
PVT1-201ENST00000504719 FBXO22Q8NEZ5 403 aa28.53■■■□□ 2.16
PVT1-201ENST00000504719 TMEM40Q8WWA1 233 aa28.53■■■□□ 2.16
PVT1-201ENST00000504719 TSPYL2Q9H2G4 693 aaPredicted RBP28.53■■■□□ 2.16
PVT1-201ENST00000504719 TMX1Q9H3N1 280 aa28.53■■■□□ 2.16
PVT1-201ENST00000504719 RC3H2Q9HBD1 1191 aaKnown RBP28.53■■■□□ 2.16
PVT1-201ENST00000504719 ERVK-5Q9HDB9 667 aa28.53■■■□□ 2.16
PVT1-201ENST00000504719 REV3LO60673 3130 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 FAM205CA6NFA0 338 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 GPR32O75388 356 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 RPS6KA5O75582 802 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 STBD1O95210 358 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 VTNP04004 478 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 CLCN3P51790 818 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 FOSBP53539 338 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 CRYBB1P53674 252 aaPredicted RBP28.52■■■□□ 2.16
PVT1-201ENST00000504719 PPP2R5CQ13362 524 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 KIZQ2M2Z5 673 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 EPC2Q52LR7 807 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms