RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 RGL1Q9NZL6 768 aa23.18■■□□□ 1.3
PDGFRA-203ENST00000503856 SEPT9Q9UHD8 586 aaPredicted RBP23.18■■□□□ 1.3
PDGFRA-203ENST00000503856 CDY2AQ9Y6F7 541 aa23.18■■□□□ 1.3
PDGFRA-203ENST00000503856 ARID2Q68CP9 1835 aa23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 SZT2Q5T011 3432 aa23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 DDX11L8A8MPP1 907 aa23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 RPLP2P05387 115 aaKnown RBP23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 TARBP2Q15633 366 aaKnown RBP23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 PLEKHG4Q58EX7 1191 aa23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 KIAA0319LQ8IZA0 1049 aa23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 DYDC2Q96IM9 177 aa23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 NIFKQ9BYG3 293 aaKnown RBP23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 FOXD4L1Q9NU39 408 aa23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 WRAP73Q9P2S5 460 aaPredicted RBP23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 PCDHB6Q9Y5E3 794 aa23.17■■□□□ 1.3
PDGFRA-203ENST00000503856 MAGEB2O15479 319 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 BAIAP3O94812 1187 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 OR52Z1P0C646 297 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 MTERF2Q49AM1 385 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 IER5Q5VY09 327 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 NME8Q8N427 588 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 METTL13Q8N6R0 699 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 C4orf32Q8N8J7 132 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 SH2D3AQ9BRG2 576 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 LXNQ9BS40 222 aa23.16■■□□□ 1.3
PDGFRA-203ENST00000503856 POTEMA6NI47 508 aa23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 DKC1O60832 514 aaKnown RBP eCLIP23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 GHRP10912 638 aa23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 CYP4A11Q02928 519 aa23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 IKBKEQ14164 716 aa23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 CTTNQ14247 550 aaKnown RBP23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 GPR153Q6NV75 609 aa23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 EFCAB12Q6NXP0 572 aa23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 ANO5Q75V66 913 aa23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 EIF2AK1Q9BQI3 630 aaKnown RBP23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 TRPV2Q9Y5S1 764 aa23.15■■□□□ 1.3
PDGFRA-203ENST00000503856 ABHD14A-ACY1A0A1B0GW23 586 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 M0QZ92 97 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 SLITRK3O94933 977 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 ATP2A2P16615 1042 aaKnown RBP23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 PDCP20941 246 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 TECP42680 631 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 CLCN3P51790 818 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 WDR5P61964 334 aaKnown RBP23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 TBC1D8BQ0IIM8 1120 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 LPIN1Q14693 890 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 FBXO47Q5MNV8 452 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 PLA2G4FQ68DD2 849 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 HSCBQ8IWL3 235 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 TPH2Q8IWU9 490 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 C4orf19Q8IY42 314 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 LRRC71Q8N4P6 559 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 SEPT8Q92599 483 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 CEP89Q96ST8 783 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 HSD17B14Q9BPX1 270 aa23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 CELF4Q9BZC1 486 aaKnown RBP23.14■■□□□ 1.29
PDGFRA-203ENST00000503856 PBX2P40425 430 aa23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 KCNJ6P48051 423 aa23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 PTGDRQ13258 359 aa23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 RILPL1Q5EBL4 403 aa23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 LINC01465Q8N7H1 131 aa23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 PBX4Q9BYU1 374 aa23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 IFIH1Q9BYX4 1025 aaKnown RBP23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 ZSWIM4Q9H7M6 989 aa23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 SUGCTQ9HAC7 445 aa23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.13■■□□□ 1.29
PDGFRA-203ENST00000503856 KDM3AQ9Y4C1 1321 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 VPS37CA5D8V6 355 aaPredicted RBP23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 ZBTB39O15060 712 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 VTNP04004 478 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 DNAJB2P25686 324 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 NPEPPSP55786 919 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 Q7L0L9 218 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 PPP1R16BQ96T49 567 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 SLC9A7Q96T83 725 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 CDHR5Q9HBB8 845 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 GINS2Q9Y248 185 aa23.12■■□□□ 1.29
PDGFRA-203ENST00000503856 EFCAB14O75071 495 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 SYT1P21579 422 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 TMOD1P28289 359 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 YWHABP31946 246 aaKnown RBP23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 RABGGTBP53611 331 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 DEFB103AP81534 67 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 TSHZ1Q6ZSZ6 1077 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 FERMT3Q86UX7 667 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 ZNF579Q8NAF0 562 aaKnown RBP23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 PHOSPHO2Q8TCD6 241 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 NEK9Q8TD19 979 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 AGO3Q9H9G7 860 aaKnown RBP23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 CYP26B1Q9NR63 512 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 AKT3Q9Y243 479 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 SQORQ9Y6N5 450 aa23.11■■□□□ 1.29
PDGFRA-203ENST00000503856 TTC3P53804 2025 aa23.1■■□□□ 1.29
PDGFRA-203ENST00000503856 IGKV6-21A0A0C4DH24 114 aa23.1■■□□□ 1.29
PDGFRA-203ENST00000503856 MKRN4PQ13434 485 aaPredicted RBP23.1■■□□□ 1.29
PDGFRA-203ENST00000503856 KIZQ2M2Z5 673 aa23.1■■□□□ 1.29
PDGFRA-203ENST00000503856 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.1■■□□□ 1.29
PDGFRA-203ENST00000503856 OTUD6AQ7L8S5 288 aa23.1■■□□□ 1.29
PDGFRA-203ENST00000503856 DEFB123Q8N688 67 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms