RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 REXO2Q9Y3B8 237 aaKnown RBP23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 STAM2O75886 525 aa23.5■■□□□ 1.35
UBE2D3-216ENST00000503742 RPL13P26373 211 aaKnown RBP23.5■■□□□ 1.35
UBE2D3-216ENST00000503742 ZC2HC1CQ53FD0 456 aaPredicted RBP23.5■■□□□ 1.35
UBE2D3-216ENST00000503742 DPY19L2Q6NUT2 758 aa23.5■■□□□ 1.35
UBE2D3-216ENST00000503742 ZC3H15Q8WU90 426 aaKnown RBP23.5■■□□□ 1.35
UBE2D3-216ENST00000503742 LZTFL1Q9NQ48 299 aa23.5■■□□□ 1.35
UBE2D3-216ENST00000503742 WDR81Q562E7 1941 aa23.5■■□□□ 1.35
UBE2D3-216ENST00000503742 A0A0G2JLL6 359 aaPredicted RBP23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 SLC16A3O15427 465 aaKnown RBP23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 PPP1R37O75864 691 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 KCNA2P16389 499 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 YWHABP31946 246 aaKnown RBP23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 PSMC5P62195 406 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 ODR4Q5SWX8 454 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 PRRT2Q7Z6L0 340 aaPredicted RBP23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 PROCA1Q8NCQ7 364 aaPredicted RBP23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 BAP1Q92560 729 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 CDCA5Q96FF9 252 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 IRF6O14896 467 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 AKAP3O75969 853 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 ARHGAP25P42331 645 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 STXBP4Q6ZWJ1 553 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 CCDC170Q8IYT3 715 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 NEK11Q8NG66 645 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 MOV10L1Q9BXT6 1211 aaKnown RBP23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 ELP3Q9H9T3 547 aa23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 ARMCX3Q9UH62 379 aaPredicted RBP23.49■■□□□ 1.35
UBE2D3-216ENST00000503742 PPP2R3AQ06190 1150 aa23.48■■□□□ 1.35
UBE2D3-216ENST00000503742 ERO1BQ86YB8 467 aa23.48■■□□□ 1.35
UBE2D3-216ENST00000503742 ANKRD13AQ8IZ07 590 aa23.48■■□□□ 1.35
UBE2D3-216ENST00000503742 IRX2Q9BZI1 471 aaPredicted RBP23.48■■□□□ 1.35
UBE2D3-216ENST00000503742 NHEJ1Q9H9Q4 299 aaPredicted RBP23.48■■□□□ 1.35
UBE2D3-216ENST00000503742 BTBD7Q9P203 1132 aa23.48■■□□□ 1.35
UBE2D3-216ENST00000503742 PCDHB13Q9Y5F0 798 aa23.48■■□□□ 1.35
UBE2D3-216ENST00000503742 NFASCO94856 1347 aa23.48■■□□□ 1.35
UBE2D3-216ENST00000503742 NOL4O94818 638 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 MAPTP10636 758 aaKnown RBP23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 CASQ1P31415 396 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 EPHX2P34913 555 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 KCNH2Q12809 1159 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 RIOX2Q8IUF8 465 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 CDHR1Q96JP9 859 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 CLMNQ96JQ2 1002 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 IWS1Q96ST2 819 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 METTL14Q9HCE5 456 aaKnown RBP23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 ANKEF1Q9NU02 776 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 TCEAL9Q9UHQ7 104 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 ZNF215Q9UL58 517 aaPredicted RBP23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 SPDYE5A6NIY4 337 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 CXCL11O14625 94 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 CLIC2O15247 247 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 SLU7O95391 586 aaKnown RBP23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 DNERQ8NFT8 737 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 PCDHA10Q9Y5I2 948 aa23.47■■□□□ 1.35
UBE2D3-216ENST00000503742 NF2P35240 595 aa23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 CYLC1P35663 651 aaPredicted RBP23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 CASP4P49662 377 aa23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 ARHGAP29Q52LW3 1261 aa23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 GADL1Q6ZQY3 521 aa23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 SMAP1Q8IYB5 467 aaPredicted RBP23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 OTUD5Q96G74 571 aa23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 BORCS6Q96GS4 357 aa23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 TIPINQ9BVW5 301 aa23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 IKZF4Q9H2S9 585 aa23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 CEP72Q9P209 647 aa23.46■■□□□ 1.35
UBE2D3-216ENST00000503742 SPATA31C2B4DYI2 1134 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 EIF3CLB5ME19 914 aaKnown RBP23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 KIF5CO60282 957 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 ABL1P00519 1130 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 EPB41P11171 864 aaKnown RBP23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 HERVK_113P62684 666 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 PDXDC1Q6P996 788 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 ZNF662Q6ZS27 426 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 KSR1Q8IVT5 923 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 ZNF710Q8N1W2 664 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 EIF3CQ99613 913 aaKnown RBP23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 LARSQ9P2J5 1176 aaKnown RBP23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 FBXO40Q9UH90 709 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 KCNH4Q9UQ05 1017 aa23.45■■□□□ 1.35
UBE2D3-216ENST00000503742 LRRC53A6NM62 1247 aa23.45■■□□□ 1.34
UBE2D3-216ENST00000503742 BACH1O14867 736 aa23.45■■□□□ 1.34
UBE2D3-216ENST00000503742 MOB2Q70IA6 237 aa23.45■■□□□ 1.34
UBE2D3-216ENST00000503742 RRAGAQ7L523 313 aa23.45■■□□□ 1.34
UBE2D3-216ENST00000503742 ERO1AQ96HE7 468 aa23.45■■□□□ 1.34
UBE2D3-216ENST00000503742 LSM14BQ9BX40 385 aaKnown RBP23.45■■□□□ 1.34
UBE2D3-216ENST00000503742 DMAC2Q9NW81 257 aa23.45■■□□□ 1.34
UBE2D3-216ENST00000503742 PFASO15067 1338 aa23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 DOCK5Q9H7D0 1870 aa23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 TMEM150BA6NC51 233 aa23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 PEX10O60683 326 aa23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 USO1O60763 962 aaKnown RBP23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 AFPP02771 609 aaKnown RBP23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 XRCC5P13010 732 aaKnown RBP23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 PLS3P13797 630 aa23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 KRT83P78385 493 aa23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 GNPTABQ3T906 1256 aa23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 MKNK1Q9BUB5 465 aa23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 GBP3Q9H0R5 595 aa23.44■■□□□ 1.34
UBE2D3-216ENST00000503742 ARHGAP20Q9P2F6 1191 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms