RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ASGR1P07306 291 aa22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 CXCL17Q6UXB2 119 aa22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 CCDC34Q96HJ3 373 aa22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 CEP170P1Q96L14 293 aa22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 CLSTN2Q9H4D0 955 aa22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 TMEM63CQ9P1W3 806 aa22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 ARHGEF35A5YM69 484 aa22.73■■□□□ 1.23
CDC42SE2-206ENST00000503291 MDM2Q00987 491 aaPredicted RBP22.73■■□□□ 1.23
CDC42SE2-206ENST00000503291 ARRDC4Q8NCT1 418 aa22.73■■□□□ 1.23
CDC42SE2-206ENST00000503291 MCOLN1Q9GZU1 580 aa22.73■■□□□ 1.23
CDC42SE2-206ENST00000503291 NUP62CLQ9H1M0 184 aa22.73■■□□□ 1.23
CDC42SE2-206ENST00000503291 CYP26B1Q9NR63 512 aa22.73■■□□□ 1.23
CDC42SE2-206ENST00000503291 TRPC6Q9Y210 931 aa22.73■■□□□ 1.23
CDC42SE2-206ENST00000503291 HBP1O60381 514 aa22.72■■□□□ 1.23
CDC42SE2-206ENST00000503291 CHMP4BP1P59074 171 aa22.72■■□□□ 1.23
CDC42SE2-206ENST00000503291 AMPD3Q01432 767 aa22.72■■□□□ 1.23
CDC42SE2-206ENST00000503291 ELOA2Q8IYF1 753 aaPredicted RBP22.72■■□□□ 1.23
CDC42SE2-206ENST00000503291 CCDC43Q96MW1 224 aaKnown RBP22.72■■□□□ 1.23
CDC42SE2-206ENST00000503291 MTG1Q9BT17 334 aaPredicted RBP22.72■■□□□ 1.23
CDC42SE2-206ENST00000503291 KIAA0753Q2KHM9 967 aa22.72■■□□□ 1.23
CDC42SE2-206ENST00000503291 MTERF2Q49AM1 385 aa22.72■■□□□ 1.23
CDC42SE2-206ENST00000503291 FRMPD3Q5JV73 1810 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 HAS3O00219 553 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 CASP1P29466 404 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 PSEN2P49810 448 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 MFSD10Q14728 455 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 POSTNQ15063 836 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 TARBP2Q15633 366 aaKnown RBP22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 ARSHQ5FYA8 562 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 RINT1Q6NUQ1 792 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 GPBP1Q86WP2 473 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 KATNAL1Q9BW62 490 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 BLZF1Q9H2G9 400 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 HOOK1Q9UJC3 728 aaKnown RBP22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 OGDHLQ9ULD0 1010 aa22.71■■□□□ 1.23
CDC42SE2-206ENST00000503291 MYMKA6NI61 221 aa22.7■■□□□ 1.23
CDC42SE2-206ENST00000503291 CYP11B2P19099 503 aa22.7■■□□□ 1.23
CDC42SE2-206ENST00000503291 CCDC183Q5T5S1 534 aa22.7■■□□□ 1.23
CDC42SE2-206ENST00000503291 PADI6Q6TGC4 694 aa22.7■■□□□ 1.23
CDC42SE2-206ENST00000503291 ERCC4Q92889 916 aaPredicted RBP22.7■■□□□ 1.23
CDC42SE2-206ENST00000503291 TSEN34Q9BSV6 310 aaKnown RBP22.7■■□□□ 1.23
CDC42SE2-206ENST00000503291 RUSC1Q9BVN2 902 aa22.7■■□□□ 1.23
CDC42SE2-206ENST00000503291 LRRC27Q9C0I9 530 aa22.7■■□□□ 1.23
CDC42SE2-206ENST00000503291 LOXHD1Q8IVV2 1947 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 GJB1P08034 283 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 PRR29P0C7W0 189 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 INSRRP14616 1297 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 ACLYP53396 1101 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 PNOCQ13519 176 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 CUL4BQ13620 913 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 C1orf186Q6ZWK4 172 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 DDX12PQ92771 950 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 SYAP1Q96A49 352 aaPredicted RBP22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 TRIM9Q9C026 710 aa22.7■■□□□ 1.22
CDC42SE2-206ENST00000503291 ZBTB42B2RXF5 422 aa22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 DYMQ7RTS9 669 aa22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 PPP1R13LQ8WUF5 828 aa22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 CEP89Q96ST8 783 aa22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 C7orf25Q9BPX7 421 aa22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 BMP2KQ9NSY1 1161 aaPredicted RBP22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 MOXD2PA6NHM9 499 aa22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 GTPBP6O43824 516 aaPredicted RBP22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 SGPL1O95470 568 aa22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 U2AF1L4Q8WU68 220 aaKnown RBP22.69■■□□□ 1.22
CDC42SE2-206ENST00000503291 NPHP3-ACAD11A0A0J9YXS1 232 aa22.68■■□□□ 1.22
CDC42SE2-206ENST00000503291 USO1O60763 962 aaKnown RBP22.68■■□□□ 1.22
CDC42SE2-206ENST00000503291 MYL1P05976 194 aa22.68■■□□□ 1.22
CDC42SE2-206ENST00000503291 RAD51AP2Q09MP3 1159 aa22.68■■□□□ 1.22
CDC42SE2-206ENST00000503291 ZNF484Q5JVG2 852 aa22.68■■□□□ 1.22
CDC42SE2-206ENST00000503291 TRAPPC12Q8WVT3 735 aa22.68■■□□□ 1.22
CDC42SE2-206ENST00000503291 CRISPLD2Q9H0B8 497 aa22.68■■□□□ 1.22
CDC42SE2-206ENST00000503291 KCND2Q9NZV8 630 aa22.68■■□□□ 1.22
CDC42SE2-206ENST00000503291 IGBP1P78318 339 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 DPYDQ12882 1025 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 PPFIA1Q13136 1202 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 DNAH12Q6ZR08 3092 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 KBTBD13C9JR72 458 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 DNM1LO00429 736 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 DGAT1O75907 488 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 CABYRO75952 493 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 TFRCP02786 760 aaKnown RBP22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 KRT18P05783 430 aaKnown RBP22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 SMIM10L2AP0DMW4 78 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 SMIM10L2BP0DMW5 78 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 GIT2Q14161 759 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 MAEAQ7L5Y9 396 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 VTI1AQ96AJ9 217 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 DNAJC19Q96DA6 116 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 POLD4Q9HCU8 107 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 PDLIM7Q9NR12 457 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 SETD4Q9NVD3 440 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 PPME1Q9Y570 386 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 PCDHA5Q9Y5H7 936 aa22.67■■□□□ 1.22
CDC42SE2-206ENST00000503291 POLGP54098 1239 aaPredicted RBP22.66■■□□□ 1.22
CDC42SE2-206ENST00000503291 TBC1D8BQ0IIM8 1120 aa22.66■■□□□ 1.22
CDC42SE2-206ENST00000503291 GRIK4Q16099 956 aa22.66■■□□□ 1.22
CDC42SE2-206ENST00000503291 NBPF20Q3BBV1 942 aa22.66■■□□□ 1.22
CDC42SE2-206ENST00000503291 CNNM4Q6P4Q7 775 aa22.66■■□□□ 1.22
CDC42SE2-206ENST00000503291 GLT1D1Q96MS3 346 aa22.66■■□□□ 1.22
CDC42SE2-206ENST00000503291 REEP2Q9BRK0 252 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms