RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 LRFN2Q9ULH4 789 aa12.2□□□□□ -0.46
SNCA-207ENST00000502987 RWDD3Q9Y3V2 267 aa12.2□□□□□ -0.46
SNCA-207ENST00000502987 PCDHA2Q9Y5H9 948 aa12.2□□□□□ -0.46
SNCA-207ENST00000502987 TTC3P53804 2025 aa12.2□□□□□ -0.46
SNCA-207ENST00000502987 ADGRA3Q8IWK6 1321 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 H3BQ06 376 aaPredicted RBP12.19□□□□□ -0.46
SNCA-207ENST00000502987 HBP1O60381 514 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 RB1P06400 928 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 STAG3L1P0CL83 205 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 SCG2P13521 617 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 KLRC1P26715 233 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 BMPR1AP36894 532 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 SLC26A2P50443 739 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 KRT76Q01546 638 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 FUT2Q10981 343 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 NFX1Q12986 1120 aaKnown RBP12.19□□□□□ -0.46
SNCA-207ENST00000502987 PFKFB3Q16875 520 aaPredicted RBP12.19□□□□□ -0.46
SNCA-207ENST00000502987 LEXMQ3ZCV2 418 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 PAN2Q504Q3 1202 aaKnown RBP12.19□□□□□ -0.46
SNCA-207ENST00000502987 PTCRAQ6ISU1 281 aaPredicted RBP12.19□□□□□ -0.46
SNCA-207ENST00000502987 SWSAP1Q6NVH7 229 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 MIS18BP1Q6P0N0 1132 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 PDXDC2PQ6P474 469 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 MTHFD1LQ6UB35 978 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 NME8Q8N427 588 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 CCDC136Q96JN2 1154 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 ZNF577Q9BSK1 485 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 C11orf84Q9BUA3 381 aaPredicted RBP12.19□□□□□ -0.46
SNCA-207ENST00000502987 FTHL17Q9BXU8 183 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 CELF4Q9BZC1 486 aaKnown RBP12.19□□□□□ -0.46
SNCA-207ENST00000502987 ZNF302Q9NR11 478 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
SNCA-207ENST00000502987 CLDND1Q9NY35 253 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 PADI3Q9ULW8 664 aa12.19□□□□□ -0.46
SNCA-207ENST00000502987 MYO7AQ13402 2215 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
SNCA-207ENST00000502987 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 NUDT7P0C024 238 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 CLK2P49760 499 aaKnown RBP12.18□□□□□ -0.46
SNCA-207ENST00000502987 RCAN1P53805 252 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 TMEM266Q2M3C6 531 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 PUS10Q3MIT2 529 aaKnown RBP12.18□□□□□ -0.46
SNCA-207ENST00000502987 SPOUT1Q5T280 376 aaKnown RBP12.18□□□□□ -0.46
SNCA-207ENST00000502987 MCTP2Q6DN12 878 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 ABHD15Q6UXT9 468 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 NIPA1Q7RTP0 329 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 REXO1Q8N1G1 1221 aaKnown RBP12.18□□□□□ -0.46
SNCA-207ENST00000502987 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.18□□□□□ -0.46
SNCA-207ENST00000502987 PHKBQ93100 1093 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 IGFLR1Q9H665 355 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 FAM50BQ9Y247 325 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 SAMM50Q9Y512 469 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 SNX14Q9Y5W7 946 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 SQORQ9Y6N5 450 aa12.18□□□□□ -0.46
SNCA-207ENST00000502987 SMIM35A0A1B0GVV1 85 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 FAM86B1E9PN63 330 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 GRM6O15303 877 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 RPS6KA5O75582 802 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 DGKIO75912 1065 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 ATG7O95352 703 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 CCNE2O96020 404 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 FAM86B2P0C5J1 330 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 IL9P15248 144 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 GNA11P29992 359 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 ZNF484Q5JVG2 852 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 ODR4Q5SWX8 454 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 RTN4RL1Q86UN2 441 aaPredicted RBP12.17□□□□□ -0.46
SNCA-207ENST00000502987 NPAS4Q8IUM7 802 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 METTL13Q8N6R0 699 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 ATP8B4Q8TF62 1192 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 PABPC5Q96DU9 382 aaKnown RBP12.17□□□□□ -0.46
SNCA-207ENST00000502987 PPP1R16BQ96T49 567 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 SLC26A6Q9BXS9 759 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 LMAN2LQ9H0V9 348 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 ALG13Q9NP73 1137 aaKnown RBP12.17□□□□□ -0.46
SNCA-207ENST00000502987 TBC1D22BQ9NU19 505 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 PCDHB7Q9Y5E2 793 aa12.17□□□□□ -0.46
SNCA-207ENST00000502987 IGSF9BQ9UPX0 1349 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 DENND3A2RUS2 1198 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 PRPF3O43395 683 aaKnown RBP12.16□□□□□ -0.46
SNCA-207ENST00000502987 NCK2O43639 380 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 PSAPP07602 524 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 CYP3A4P08684 503 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 RPS6KB1P23443 525 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 PSMA5P28066 241 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 CCT2P78371 535 aaKnown RBP12.16□□□□□ -0.46
SNCA-207ENST00000502987 SETQ01105 290 aaPredicted RBP12.16□□□□□ -0.46
SNCA-207ENST00000502987 CLUL1Q15846 466 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 PRR16Q569H4 304 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 TMEM31Q5JXX7 168 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 CCDC60Q8IWA6 550 aaPredicted RBP12.16□□□□□ -0.46
SNCA-207ENST00000502987 FAM178BQ8IXR5 827 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 GJD3Q8N144 294 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 LINC01599Q8WXQ3 324 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 ZNF689Q96CS4 500 aaPredicted RBP12.16□□□□□ -0.46
SNCA-207ENST00000502987 ZMYND12Q9H0C1 365 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 C5orf42Q9H799 3197 aa12.16□□□□□ -0.46
SNCA-207ENST00000502987 WDR81Q562E7 1941 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms