RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 KRT28Q7Z3Y7 464 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 E5RI56 91 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 COPEO14579 308 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 TJP3O95049 919 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 LCA5LO95447 670 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 PDE1AP54750 535 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 NUP107P57740 925 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 SURF1Q15526 300 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 KIAA1755Q5JYT7 1200 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 CHURC1Q8WUH1 139 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 NACC1Q96RE7 527 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 ARMC3Q5W041 872 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 EPN1Q9Y6I3 576 aaPredicted RBP11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 DYTNA2CJ06 578 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 STXBP3O00186 592 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 PIK3CDO00329 1044 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 PRPSAP2O60256 369 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 ABCB1P08183 1280 aaPredicted RBP11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 MXD4Q14582 209 aaPredicted RBP11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 KCTD16Q68DU8 428 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 PIK3R5Q8WYR1 880 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 PRKAG2Q9UGJ0 569 aa11.94□□□□□ -0.5
AC055713.1-201ENST00000498967 CLASP2O75122 1294 aaKnown RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 JAK1P23458 1154 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 SHROOM1Q2M3G4 852 aaPredicted RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 CYP4F22Q6NT55 531 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 KIFC1Q9BW19 673 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 SRPRBQ9Y5M8 271 aaKnown RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 AP3B1O00203 1094 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 PEX1O43933 1283 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 PDHA1P08559 390 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 RASGRF1Q13972 1273 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 EXOC3L4Q17RC7 722 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 SH3BP5LQ7L8J4 393 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 POLR3AO14802 1390 aaPredicted RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 ACEP12821 1306 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 NCALDP61601 193 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 MRPS35P82673 323 aaKnown RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 HPCAP84074 193 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 PPIDQ08752 370 aaKnown RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 TAB1Q15750 504 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 RFT1Q96AA3 541 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 PRRG3Q9BZD7 231 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 EPN3Q9H201 632 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 TAB2Q9NYJ8 693 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 ITSN2Q9NZM3 1697 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 SMIM31A0A1B0GVY4 71 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 KLC1Q07866 573 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 FAM160B1Q5W0V3 765 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 MFN1Q8IWA4 741 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 RMND5BQ96G75 393 aaPredicted RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 BBS2Q9BXC9 721 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 ZMYND12Q9H0C1 365 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 SMYD3Q9H7B4 428 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 HACD3Q9P035 362 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 LBRQ14739 615 aaKnown RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 EIF2AK4Q9P2K8 1649 aaKnown RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 SLC10A5Q5PT55 438 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 PIK3AP1Q6ZUJ8 805 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 DNAJC7Q99615 494 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 CYP26B1Q9NR63 512 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 SNPHO15079 494 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 ZBED1O96006 694 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 SLC25A24Q6NUK1 477 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 NT5C1BQ96P26 610 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 CCDC134Q9H6E4 229 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 ZFP69BQ9UJL9 534 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 DIS3Q9Y2L1 958 aaKnown RBP11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 DISP3Q9P2K9 1392 aa11.93□□□□□ -0.5
AC055713.1-201ENST00000498967 PRR23AA6NEV1 266 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 ZNF568Q3ZCX4 644 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 TTC13Q8NBP0 860 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 CDC23Q9UJX2 597 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 CYP2J2P51589 502 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 CUL4AQ13619 759 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 RP1P56715 2156 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 POLGP54098 1239 aaPredicted RBP11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 DDX25Q9UHL0 483 aaKnown RBP11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 HNMTP50135 292 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 DMTNQ08495 405 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 TMC5Q6UXY8 1006 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 TPH2Q8IWU9 490 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 ATP8B4Q8TF62 1192 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 RASSF5Q8WWW0 418 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 CASP10Q92851 521 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 YIPF3Q9GZM5 350 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 SPRTNQ9H040 489 aaPredicted RBP11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 KLHL18O94889 574 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 CCDC130P13994 396 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 TGFBR2P37173 567 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 AK2P54819 239 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 MAPRE1Q15691 268 aaKnown RBP11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 RGS9BPQ6ZS82 235 aa11.92□□□□□ -0.5
AC055713.1-201ENST00000498967 CMTM5Q96DZ9 223 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms