RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 BORCS6Q96GS4 357 aa4.11□□□□□ -1.75
RIF1-212ENST00000498041 LCORQ96JN0 433 aaPredicted RBP4.11□□□□□ -1.75
RIF1-212ENST00000498041 BTBD2Q9BX70 525 aa4.11□□□□□ -1.75
RIF1-212ENST00000498041 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.11□□□□□ -1.75
RIF1-212ENST00000498041 USP40Q9NVE5 1235 aa4.11□□□□□ -1.75
RIF1-212ENST00000498041 OXSMQ9NWU1 459 aa4.11□□□□□ -1.75
RIF1-212ENST00000498041 SPO11Q9Y5K1 396 aa4.11□□□□□ -1.75
RIF1-212ENST00000498041 ZNF891A8MT65 544 aaPredicted RBP4.1□□□□□ -1.75
RIF1-212ENST00000498041 KLHL18O94889 574 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 MPIG6BO95866 241 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 SLC9A1P19634 815 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 ECE1P42892 770 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 STILQ15468 1287 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 SEPT7Q16181 437 aaKnown RBP4.1□□□□□ -1.75
RIF1-212ENST00000498041 CREB3L3Q68CJ9 461 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 CXXC5Q7LFL8 322 aaKnown RBP4.1□□□□□ -1.75
RIF1-212ENST00000498041 FRMD5Q7Z6J6 570 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 NME9Q86XW9 330 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 THNSL2Q86YJ6 484 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 PASD1Q8IV76 773 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 KLHL36Q8N4N3 616 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 EFHBQ8N7U6 833 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 NUDT10Q8NFP7 164 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 CALML6Q8TD86 181 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 LEO1Q8WVC0 666 aaPredicted RBP4.1□□□□□ -1.75
RIF1-212ENST00000498041 ERCC4Q92889 916 aaPredicted RBP4.1□□□□□ -1.75
RIF1-212ENST00000498041 NUDT11Q96G61 164 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 ELF4Q99607 663 aaPredicted RBP4.1□□□□□ -1.75
RIF1-212ENST00000498041 GPR20Q99678 358 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 AMNQ9BXJ7 453 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 BARX1Q9HBU1 254 aaPredicted RBP4.1□□□□□ -1.75
RIF1-212ENST00000498041 THG1LQ9NWX6 298 aaKnown RBP4.1□□□□□ -1.75
RIF1-212ENST00000498041 CADPSQ9ULU8 1353 aa4.1□□□□□ -1.75
RIF1-212ENST00000498041 MASP1P48740 699 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 KPNA1P52294 538 aaPredicted RBP4.09□□□□□ -1.75
RIF1-212ENST00000498041 IL13RA1P78552 427 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 OCRLQ01968 901 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 ALDH6A1Q02252 535 aaKnown RBP4.09□□□□□ -1.75
RIF1-212ENST00000498041 ADCY1Q08828 1119 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 NFATC3Q12968 1075 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 EPHA7Q15375 998 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 WDR72Q3MJ13 1102 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 BORAQ6PGQ7 559 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 LRSAM1Q6UWE0 723 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 Q6ZUG5 572 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 DDX46Q7L014 1031 aaKnown RBP4.09□□□□□ -1.75
RIF1-212ENST00000498041 RTN4RL1Q86UN2 441 aaPredicted RBP4.09□□□□□ -1.75
RIF1-212ENST00000498041 SMC1BQ8NDV3 1235 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 CHTF18Q8WVB6 975 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 FOXRED1Q96CU9 486 aaPredicted RBP4.09□□□□□ -1.75
RIF1-212ENST00000498041 SCYL1Q96KG9 808 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 C16orf92Q96LL3 132 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 FOXB1Q99853 325 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 OR10A5Q9H207 317 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 TMX1Q9H3N1 280 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 CAAP1Q9H8G2 361 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 TOMM22Q9NS69 142 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 FBXO10Q9UK96 956 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 PRKAB1Q9Y478 270 aa4.09□□□□□ -1.75
RIF1-212ENST00000498041 UBA6A0AVT1 1052 aaPredicted RBP4.08□□□□□ -1.76
RIF1-212ENST00000498041 CUTAO60888 179 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 PTX3P26022 381 aaPredicted RBP4.08□□□□□ -1.76
RIF1-212ENST00000498041 APEX1P27695 318 aaKnown RBP4.08□□□□□ -1.76
RIF1-212ENST00000498041 POLD1P28340 1107 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 SOX5P35711 763 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 STAT3P40763 770 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 LSSP48449 732 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 IL2P60568 153 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 ROM1Q03395 351 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 DHCR24Q15392 516 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 SPATS1Q496A3 300 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 TTC38Q5R3I4 469 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 KANK2Q63ZY3 851 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 RNF180Q86T96 592 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 C11orf74Q86VG3 221 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 REXO1L1PQ8IX06 675 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 ZZZ3Q8IYH5 903 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 LGI4Q8N135 537 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 CHAC2Q8WUX2 184 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 MBD6Q96DN6 1003 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 AJUBAQ96IF1 538 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 MAML3Q96JK9 1138 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 TEPSINQ96N21 525 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 GPR101Q96P66 508 aaPredicted RBP4.08□□□□□ -1.76
RIF1-212ENST00000498041 H2AFY2Q9P0M6 372 aaPredicted RBP4.08□□□□□ -1.76
RIF1-212ENST00000498041 ADAM29Q9UKF5 820 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 ZDHHC9Q9Y397 364 aa4.08□□□□□ -1.76
RIF1-212ENST00000498041 PRICKLE3O43900 615 aaPredicted RBP4.07□□□□□ -1.76
RIF1-212ENST00000498041 MAFO75444 373 aaPredicted RBP4.07□□□□□ -1.76
RIF1-212ENST00000498041 FKBP9O95302 570 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 PRLP01236 227 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 CD40P25942 277 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 ADCYAP1R1P41586 468 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 CD83Q01151 205 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 SLC6A3Q01959 620 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 TOP3AQ13472 1001 aaPredicted RBP4.07□□□□□ -1.76
RIF1-212ENST00000498041 UBXN11Q5T124 520 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 ZFYVE27Q5T4F4 411 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 ESRP1Q6NXG1 681 aaKnown RBP4.07□□□□□ -1.76
RIF1-212ENST00000498041 FKBP9P1Q75LS8 142 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms