RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SNX21Q969T3 373 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 DISC1Q9NRI5 854 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 MAFBQ9Y5Q3 323 aaPredicted RBP12.68□□□□□ -0.38
ERCC8-208ENST00000497892 SIP14410 1827 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 INSRRP14616 1297 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 TRAPPC10P48553 1259 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 PPP2R5CQ13362 524 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 ORC2Q13416 577 aaPredicted RBP12.67□□□□□ -0.38
ERCC8-208ENST00000497892 MARCH8Q5T0T0 291 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 PDXDC2PQ6P474 469 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 LRRC8DQ7L1W4 858 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 SLFN12Q8IYM2 578 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 TNPO1Q92973 898 aaKnown RBP12.67□□□□□ -0.38
ERCC8-208ENST00000497892 INTS4Q96HW7 963 aaKnown RBP12.67□□□□□ -0.38
ERCC8-208ENST00000497892 SCLYQ96I15 445 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 IL23AQ9NPF7 189 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 GABBR1Q9UBS5 961 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 TUBE1Q9UJT0 475 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 COL1A2P08123 1366 aa12.67□□□□□ -0.38
ERCC8-208ENST00000497892 MBLAC1A4D2B0 266 aaPredicted RBP12.66□□□□□ -0.38
ERCC8-208ENST00000497892 RRN3P2A6NIE6 340 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 CAND2O75155 1236 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 IQCF3P0C7M6 154 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 CKBP12277 381 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 SELPP16109 830 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 ATP4AP20648 1035 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 RFC2P35250 354 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 SPIRE1Q08AE8 756 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 CALCRLQ16602 461 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 UGCGQ16739 394 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 C9orf50Q5SZB4 431 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 TAF2Q6P1X5 1199 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 PSRC1Q6PGN9 363 aaPredicted RBP12.66□□□□□ -0.38
ERCC8-208ENST00000497892 TRAF7Q6Q0C0 670 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 C16orf59Q7L2K0 433 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 MIER3Q7Z3K6 550 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 RETREG2Q8NC44 543 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 VWCEQ96DN2 955 aa12.66□□□□□ -0.38
ERCC8-208ENST00000497892 H3BQV1 296 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 EML1O00423 815 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 ZNF862O60290 1169 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 HBP1O60381 514 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 BAG4O95429 457 aaKnown RBP12.65□□□□□ -0.38
ERCC8-208ENST00000497892 PFKMP08237 780 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 MCM7P33993 719 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 IGBP1P78318 339 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 PRKCEQ02156 737 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 SHHQ15465 462 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 TTC38Q5R3I4 469 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 LARP1BQ659C4 914 aaKnown RBP12.65□□□□□ -0.38
ERCC8-208ENST00000497892 RPAINQ86UA6 219 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 LAPTM4BQ86VI4 370 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 CKAP2LQ8IYA6 745 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 TRAPPC12Q8WVT3 735 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 FAM167AQ96KS9 214 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 MTMR9Q96QG7 549 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.65□□□□□ -0.38
ERCC8-208ENST00000497892 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
ERCC8-208ENST00000497892 TET1Q8NFU7 2136 aa12.65□□□□□ -0.38
ERCC8-208ENST00000497892 ARID2Q68CP9 1835 aa12.65□□□□□ -0.39
ERCC8-208ENST00000497892 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
ERCC8-208ENST00000497892 ZBTB42B2RXF5 422 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 MARCH6O60337 910 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
ERCC8-208ENST00000497892 OATP04181 439 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 ACRP10323 421 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 PDCP20941 246 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 THPOP40225 353 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 TOB1P50616 345 aaPredicted RBP12.64□□□□□ -0.39
ERCC8-208ENST00000497892 MBTPS1Q14703 1052 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 E2F4Q16254 413 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 LRIT3Q3SXY7 679 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 ZNF484Q5JVG2 852 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 TMEM240Q5SV17 173 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 ZNF618Q5T7W0 954 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 MCTP1Q6DN14 999 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 RUFY4Q6ZNE9 571 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 RPUSD2Q8IZ73 545 aaKnown RBP12.64□□□□□ -0.39
ERCC8-208ENST00000497892 TMEM60Q9H2L4 133 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 TTC12Q9H892 705 aaPredicted RBP12.64□□□□□ -0.39
ERCC8-208ENST00000497892 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 PCDHA12Q9UN75 941 aa12.64□□□□□ -0.39
ERCC8-208ENST00000497892 RPLP2P05387 115 aaKnown RBP12.63□□□□□ -0.39
ERCC8-208ENST00000497892 OR52Z1P0C646 297 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 NBR1Q14596 966 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 GPNMBQ14956 572 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 RILPL1Q5EBL4 403 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 RASIP1Q5U651 963 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 MTHFD1LQ6UB35 978 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 ZNF365Q70YC5 407 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 BANK1Q8NDB2 785 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 ZBTB10Q96DT7 871 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 RNPC3Q96LT9 517 aaKnown RBP12.63□□□□□ -0.39
ERCC8-208ENST00000497892 CEP131Q9UPN4 1083 aa12.63□□□□□ -0.39
ERCC8-208ENST00000497892 ARIH1Q9Y4X5 557 aaPredicted RBP12.63□□□□□ -0.39
ERCC8-208ENST00000497892 PCDHA2Q9Y5H9 948 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms