RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 NME8Q8N427 588 aa17.97■□□□□ 0.47
CTDSP1-214ENST00000497677 SEPT8Q92599 483 aa17.97■□□□□ 0.47
CTDSP1-214ENST00000497677 FAM167AQ96KS9 214 aa17.97■□□□□ 0.47
CTDSP1-214ENST00000497677 CDX2Q99626 313 aaPredicted RBP17.97■□□□□ 0.47
CTDSP1-214ENST00000497677 NKX2-4Q9H2Z4 354 aa17.97■□□□□ 0.47
CTDSP1-214ENST00000497677 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
CTDSP1-214ENST00000497677 MSRAQ9UJ68 235 aa17.97■□□□□ 0.47
CTDSP1-214ENST00000497677 EFCAB14O75071 495 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 OATP04181 439 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 GHRP10912 638 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 KCNJ6P48051 423 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 SAFBQ15424 915 aaKnown RBP eCLIP17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 TARBP2Q15633 366 aaKnown RBP17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 IER5Q5VY09 327 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 TMCO2Q7Z6W1 182 aaPredicted RBP17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 LINC01465Q8N7H1 131 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 FAM184AQ8NB25 1140 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 CEP89Q96ST8 783 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 AGO3Q9H9G7 860 aaKnown RBP17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 NRBP2Q9NSY0 501 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 SMC3Q9UQE7 1217 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 STXBP5LQ9Y2K9 1186 aa17.96■□□□□ 0.47
CTDSP1-214ENST00000497677 KDM3AQ9Y4C1 1321 aa17.96■□□□□ 0.46
CTDSP1-214ENST00000497677 TMEM62Q0P6H9 643 aa17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 MTMR9Q96QG7 549 aa17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 NIFKQ9BYG3 293 aaKnown RBP17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 IFIH1Q9BYX4 1025 aaKnown RBP17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 CELF4Q9BZC1 486 aaKnown RBP17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 CEP131Q9UPN4 1083 aa17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 KIF3AQ9Y496 699 aa17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 TRPV2Q9Y5S1 764 aa17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 SQORQ9Y6N5 450 aa17.95■□□□□ 0.46
CTDSP1-214ENST00000497677 CDH23Q9H251 3354 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 KIF28PB7ZC32 967 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 ARHGEF15O94989 841 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 PDCP20941 246 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 XKR3Q5GH77 459 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 SLFN12Q8IYM2 578 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 BANK1Q8NDB2 785 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 APBB2Q92870 758 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 TMEM60Q9H2L4 133 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 CDHR5Q9HBB8 845 aa17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 WRAP73Q9P2S5 460 aaPredicted RBP17.94■□□□□ 0.46
CTDSP1-214ENST00000497677 TMEM150BA6NC51 233 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 MAGEB2O15479 319 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 GJB5O95377 273 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 CA3P07451 260 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 U2AF2P26368 475 aaKnown RBP eCLIP17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 PSMC5P62195 406 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 EPHA7Q15375 998 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 CALCRLQ16602 461 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 TSHZ1Q6ZSZ6 1077 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 ANO5Q75V66 913 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 SLC28A3Q9HAS3 691 aa17.93■□□□□ 0.46
CTDSP1-214ENST00000497677 MARCH6O60337 910 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 NEMFO60524 1076 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 GPR32O75388 356 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 BAG4O95429 457 aaKnown RBP17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 P4HBP07237 508 aaKnown RBP17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 ATP2B1P20020 1258 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 QARSP47897 775 aaKnown RBP17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 EFCAB12Q6NXP0 572 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 NOSTRINQ8IVI9 506 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 METTL13Q8N6R0 699 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 USP38Q8NB14 1042 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 MYLIPQ8WY64 445 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 GBP4Q96PP9 640 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 RGL1Q9NZL6 768 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 PCDHA12Q9UN75 941 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 COL6A3P12111 3177 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 CHD9Q3L8U1 2897 aa17.92■□□□□ 0.46
CTDSP1-214ENST00000497677 IGKV6-21A0A0C4DH24 114 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 LCHNA4D1U4 455 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 M0QZ92 97 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 ENPP3O14638 875 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 TLL1O43897 1013 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 AMHP03971 560 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 VTNP04004 478 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 PTMSP20962 102 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 CD52P31358 61 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 MCM7P33993 719 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 CLCN3P51790 818 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 TAP1Q03518 808 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 PPP2R2DQ66LE6 453 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 RTN4RL1Q86UN2 441 aaPredicted RBP17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 LRRC71Q8N4P6 559 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 TMEM40Q8WWA1 233 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 TOP1MTQ969P6 601 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 RAD9AQ99638 391 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 HSD17B14Q9BPX1 270 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 SH2D3AQ9BRG2 576 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 TTC12Q9H892 705 aaPredicted RBP17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 PADI3Q9ULW8 664 aa17.91■□□□□ 0.46
CTDSP1-214ENST00000497677 SLITRK3O94933 977 aa17.9■□□□□ 0.46
CTDSP1-214ENST00000497677 GJB2P29033 226 aa17.9■□□□□ 0.46
CTDSP1-214ENST00000497677 TXKP42681 527 aa17.9■□□□□ 0.46
CTDSP1-214ENST00000497677 TRAPPC10P48553 1259 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms