RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 ASTN2O75129 1339 aaPredicted RBP12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 CTAGE15A4D2H0 777 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 ZMYND10O75800 440 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 CTAGE8P0CG41 777 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 GAP43P17677 238 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 MAN2A1Q16706 1144 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 TBC1D10BQ4KMP7 808 aaPredicted RBP12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 XRRA1Q6P2D8 792 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 CYP26C1Q6V0L0 522 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 CTAGE6Q86UF2 777 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 CTAGE4Q8IX94 777 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 HPS3Q969F9 1004 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 KCTD10Q9H3F6 313 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 RAB21Q9UL25 225 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 UBIAD1Q9Y5Z9 338 aa12.71□□□□□ -0.38
SNRNP200-208ENST00000497539 MYPNQ86TC9 1320 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 C19orf81C9J6K1 198 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 ATP2A1O14983 1001 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 ERLIN1O75477 346 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 BACE1P56817 501 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 EPHA7Q15375 998 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 NBPF12Q5TAG4 269 aaPredicted RBP12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 ZNF662Q6ZS27 426 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 MSANTD4Q8NCY6 345 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 REPS2Q8NFH8 660 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 CYP2W1Q8TAV3 490 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 HNRNPLLQ8WVV9 542 aaKnown RBP12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 CHP1Q99653 195 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 EDEM3Q9BZQ6 932 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 PSD3Q9NYI0 1048 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 GUCA1BQ9UMX6 200 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 COL11A1P12107 1806 aaPredicted RBP12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 UBE4BO95155 1302 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 EML1O00423 815 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 SRGAP2O75044 1071 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 HNRNPH3P31942 346 aaKnown RBP12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 ABCD1P33897 745 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 MAGEA8P43361 318 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 ZYXQ15942 572 aaKnown RBP12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 NFIL3Q16649 462 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 VWA3BQ502W6 1294 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 NAPGQ99747 312 aaPredicted RBP12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 IRAK4Q9NWZ3 460 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 TRAF3IP3Q9Y228 551 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 OTOFQ9HC10 1997 aa12.7□□□□□ -0.38
SNRNP200-208ENST00000497539 GOLGA6CA6NDK9 693 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 GOLGA6BA6NDN3 693 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 RASSF10A6NK89 507 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 GOLGA6DP0CG33 693 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 IDEP14735 1019 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 PTPRAP18433 802 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 LMNB1P20700 586 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 FKBP3Q00688 224 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 NLGN2Q8NFZ4 835 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 OR8K1Q8NGG5 319 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 SCFD1Q8WVM8 642 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 RIN2Q8WYP3 895 aaPredicted RBP12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 TEKT3Q9BXF9 490 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 GOLGA6AQ9NYA3 693 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 SIK3Q9Y2K2 1263 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 GJA3Q9Y6H8 435 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 B4DLN1 442 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 ZBED4O75132 1171 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 EIF3JO75822 258 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 SLITRK3O94933 977 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 ARHGAP25P42331 645 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 MTMR2Q13614 643 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 HSP90B2PQ58FF3 399 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 FKBP15Q5T1M5 1219 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 CCDC84Q86UT8 332 aaPredicted RBP12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 ZNF280CQ8ND82 737 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 SYTL5Q8TDW5 730 aaPredicted RBP12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 MIEF2Q96C03 454 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 NOC4LQ9BVI4 516 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 COL20A1Q9P218 1284 aa12.69□□□□□ -0.38
SNRNP200-208ENST00000497539 LYPLA2O95372 231 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 MTIF2P46199 727 aaKnown RBP12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 ZNF131P52739 623 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 PSMC6P62333 389 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 ZBED6P86452 979 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 TKFCQ3LXA3 575 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 SH3D19Q5HYK7 790 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 TTC19Q6DKK2 380 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 PPM1EQ8WY54 764 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 CAPZA3Q96KX2 299 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 REEP2Q9BRK0 252 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 ZNF577Q9BSK1 485 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 RPAP3Q9H6T3 665 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 FAM204AQ9H8W3 233 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 JADE2Q9NQC1 790 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 SEL1LQ9UBV2 794 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 PTPRFP10586 1907 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 TTC26A0AVF1 554 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 VWA5AO00534 786 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 PES1O00541 588 aaKnown RBP12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 EIF3DO15371 548 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 GAS7O60861 476 aa12.68□□□□□ -0.38
SNRNP200-208ENST00000497539 KRT9P35527 623 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms