RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 OATP04181 439 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 ATP4AP20648 1035 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 NEK4P51957 841 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 PRKCEQ02156 737 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 PAK2Q13177 524 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 ME3Q16798 604 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 INF2Q27J81 1249 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 NEK8Q86SG6 692 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 SAMD11Q96NU1 681 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 CELF4Q9BZC1 486 aaKnown RBP17.75■□□□□ 0.43
HDAC4-213ENST00000496347 TSPYL2Q9H2G4 693 aaPredicted RBP17.75■□□□□ 0.43
HDAC4-213ENST00000496347 DDX25Q9UHL0 483 aaKnown RBP17.75■□□□□ 0.43
HDAC4-213ENST00000496347 CHMP2AO43633 222 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 LPXNO60711 386 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 TMEM62Q0P6H9 643 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 GRB10Q13322 594 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 SPRED2Q7Z698 418 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 ZNF710Q8N1W2 664 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 GDPD5Q8WTR4 605 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 ATXN2LQ8WWM7 1075 aaKnown RBP17.74■□□□□ 0.43
HDAC4-213ENST00000496347 NAP1L4Q99733 375 aaKnown RBP17.74■□□□□ 0.43
HDAC4-213ENST00000496347 UNC45AQ9H3U1 944 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 AGO3Q9H9G7 860 aaKnown RBP17.74■□□□□ 0.43
HDAC4-213ENST00000496347 BRMS1Q9HCU9 246 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 LMCD1Q9NZU5 365 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 BDP1A6H8Y1 2624 aa17.74■□□□□ 0.43
HDAC4-213ENST00000496347 ADGRA3Q8IWK6 1321 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 MAGEB2O15479 319 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 LARGE1O95461 756 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 CD52P31358 61 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 TJAP1Q5JTD0 557 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 PPP4R3AQ6IN85 833 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 B3GNT9Q6UX72 402 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 KIAA0319LQ8IZA0 1049 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 MICALL1Q8N3F8 863 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 NSUN7Q8NE18 718 aaKnown RBP17.73■□□□□ 0.43
HDAC4-213ENST00000496347 PPM1EQ8WY54 764 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 RC3H2Q9HBD1 1191 aaKnown RBP17.73■□□□□ 0.43
HDAC4-213ENST00000496347 MTUS1Q9ULD2 1270 aa17.73■□□□□ 0.43
HDAC4-213ENST00000496347 KIAA1671Q9BY89 1806 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 RFXAPO00287 272 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 SLC37A4O43826 429 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 ZNF862O60290 1169 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 UPP2O95045 317 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 SEC24BO95487 1268 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 CCDC85BQ15834 202 aaPredicted RBP17.72■□□□□ 0.43
HDAC4-213ENST00000496347 UGCGQ16739 394 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 LETM2Q2VYF4 491 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 ODR4Q5SWX8 454 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 MIER3Q7Z3K6 550 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 NECAB1Q8N987 351 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 FBXO22Q8NEZ5 403 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 LINC01599Q8WXQ3 324 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 FAM20AQ96MK3 541 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 MAP7D2Q96T17 732 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 COL25A1Q9BXS0 654 aaPredicted RBP17.72■□□□□ 0.43
HDAC4-213ENST00000496347 SUGCTQ9HAC7 445 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 KCNMB3Q9NPA1 279 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 PADI3Q9ULW8 664 aa17.72■□□□□ 0.43
HDAC4-213ENST00000496347 RBAK-RBAKDNI3L0D1 243 aa17.71■□□□□ 0.43
HDAC4-213ENST00000496347 TBX3O15119 743 aa17.71■□□□□ 0.43
HDAC4-213ENST00000496347 TMOD1P28289 359 aa17.71■□□□□ 0.43
HDAC4-213ENST00000496347 KRT2P35908 639 aa17.71■□□□□ 0.43
HDAC4-213ENST00000496347 PPP2R5CQ13362 524 aa17.71■□□□□ 0.43
HDAC4-213ENST00000496347 PIK3AP1Q6ZUJ8 805 aa17.71■□□□□ 0.43
HDAC4-213ENST00000496347 METTL13Q8N6R0 699 aa17.71■□□□□ 0.43
HDAC4-213ENST00000496347 SYMPKQ92797 1274 aaKnown RBP17.71■□□□□ 0.43
HDAC4-213ENST00000496347 NRBP2Q9NSY0 501 aa17.71■□□□□ 0.43
HDAC4-213ENST00000496347 RWDD3Q9Y3V2 267 aa17.71■□□□□ 0.43
HDAC4-213ENST00000496347 ARID2Q68CP9 1835 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 ENPP3O14638 875 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 FDPSP14324 419 aaKnown RBP17.7■□□□□ 0.42
HDAC4-213ENST00000496347 CRYBB1P53674 252 aaPredicted RBP17.7■□□□□ 0.42
HDAC4-213ENST00000496347 C8orf34Q49A92 452 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 EPC2Q52LR7 807 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 NPAS4Q8IUM7 802 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 LINC01465Q8N7H1 131 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 OXER1Q8TDS5 423 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 GJA10Q969M2 543 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 C17orf80Q9BSJ5 609 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 ERVK-5Q9HDB9 667 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 PRDM6Q9NQX0 595 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 GJB4Q9NTQ9 266 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 VAV3Q9UKW4 847 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 GINS2Q9Y248 185 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 ATG2AQ2TAZ0 1938 aa17.7■□□□□ 0.42
HDAC4-213ENST00000496347 CCNT1O60563 726 aaKnown RBP17.69■□□□□ 0.42
HDAC4-213ENST00000496347 RPS6KA5O75582 802 aa17.69■□□□□ 0.42
HDAC4-213ENST00000496347 CLCN3P51790 818 aa17.69■□□□□ 0.42
HDAC4-213ENST00000496347 MRPS5P82675 430 aaKnown RBP17.69■□□□□ 0.42
HDAC4-213ENST00000496347 TBC1D8BQ0IIM8 1120 aa17.69■□□□□ 0.42
HDAC4-213ENST00000496347 TRIM29Q14134 588 aa17.69■□□□□ 0.42
HDAC4-213ENST00000496347 KIZQ2M2Z5 673 aa17.69■□□□□ 0.42
HDAC4-213ENST00000496347 XKR3Q5GH77 459 aa17.69■□□□□ 0.42
HDAC4-213ENST00000496347 FIBCD1Q8N539 461 aa17.69■□□□□ 0.42
HDAC4-213ENST00000496347 TMEM40Q8WWA1 233 aa17.69■□□□□ 0.42
HDAC4-213ENST00000496347 TNFRSF25Q93038 417 aa17.69■□□□□ 0.42
HDAC4-213ENST00000496347 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-213ENST00000496347 SEPT9Q9UHD8 586 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-213ENST00000496347 LIMCH1Q9UPQ0 1083 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms