RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 ARRDC4Q8NCT1 418 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 FAM167AQ96KS9 214 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 MCOLN1Q9GZU1 580 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 MAGEF1Q9HAY2 307 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 SEPT9Q9UHD8 586 aaPredicted RBP24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 XKR9Q5GH70 373 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 ELOA2Q8IYF1 753 aaPredicted RBP24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 GRAMD1CQ8IYS0 662 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 TNMDQ9H2S6 317 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 LOXHD1Q8IVV2 1947 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 HAS3O00219 553 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 HBP1O60381 514 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 KIAA0753Q2KHM9 967 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 CEP170P1Q96L14 293 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 CLSTN2Q9H4D0 955 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 CYP26B1Q9NR63 512 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 TMEM63CQ9P1W3 806 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 TRPC6Q9Y210 931 aa24.29■■□□□ 1.48
ECHDC3-205ENST00000496136 TARBP2Q15633 366 aaKnown RBP24.28■■□□□ 1.48
ECHDC3-205ENST00000496136 CAVIN1Q6NZI2 390 aaKnown RBP24.28■■□□□ 1.48
ECHDC3-205ENST00000496136 CCDC34Q96HJ3 373 aa24.28■■□□□ 1.48
ECHDC3-205ENST00000496136 MTG1Q9BT17 334 aaPredicted RBP24.28■■□□□ 1.48
ECHDC3-205ENST00000496136 OGDHLQ9ULD0 1010 aa24.28■■□□□ 1.48
ECHDC3-205ENST00000496136 KAT6AQ92794 2004 aa24.28■■□□□ 1.48
ECHDC3-205ENST00000496136 ARHGEF35A5YM69 484 aa24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 GJB1P08034 283 aa24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 PSEN2P49810 448 aa24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 AMPD3Q01432 767 aa24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 MFSD10Q14728 455 aa24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 ARSHQ5FYA8 562 aa24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 RINT1Q6NUQ1 792 aa24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 CEP89Q96ST8 783 aa24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 TSEN34Q9BSV6 310 aaKnown RBP24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 NUP62CLQ9H1M0 184 aa24.27■■□□□ 1.48
ECHDC3-205ENST00000496136 MYMKA6NI61 221 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 ZBTB42B2RXF5 422 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 SGPL1O95470 568 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 INSRRP14616 1297 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 CYP11B2P19099 503 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 CASP1P29466 404 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 ACLYP53396 1101 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 CHMP4BP1P59074 171 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 MTERF2Q49AM1 385 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 PADI6Q6TGC4 694 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 C1orf186Q6ZWK4 172 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 KATNAL1Q9BW62 490 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 SCN10AQ9Y5Y9 1956 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 KIAA0100Q14667 2235 aaKnown RBP24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 POSTNQ15063 836 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 GPBP1Q86WP2 473 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 U2AF1L4Q8WU68 220 aaKnown RBP24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 CCDC43Q96MW1 224 aaKnown RBP24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 RUSC1Q9BVN2 902 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 TRIM9Q9C026 710 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 CRISPLD2Q9H0B8 497 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 BLZF1Q9H2G9 400 aa24.26■■□□□ 1.47
ECHDC3-205ENST00000496136 MOXD2PA6NHM9 499 aa24.25■■□□□ 1.47
ECHDC3-205ENST00000496136 PRR29P0C7W0 189 aa24.25■■□□□ 1.47
ECHDC3-205ENST00000496136 PNOCQ13519 176 aa24.25■■□□□ 1.47
ECHDC3-205ENST00000496136 DDX12PQ92771 950 aa24.25■■□□□ 1.47
ECHDC3-205ENST00000496136 ERCC4Q92889 916 aaPredicted RBP24.25■■□□□ 1.47
ECHDC3-205ENST00000496136 C7orf25Q9BPX7 421 aa24.25■■□□□ 1.47
ECHDC3-205ENST00000496136 LRRC27Q9C0I9 530 aa24.25■■□□□ 1.47
ECHDC3-205ENST00000496136 HOOK1Q9UJC3 728 aaKnown RBP24.25■■□□□ 1.47
ECHDC3-205ENST00000496136 CUL4BQ13620 913 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 CCDC183Q5T5S1 534 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 PPP1R13LQ8WUF5 828 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 KCND2Q9NZV8 630 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 ARID2Q68CP9 1835 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 GTPBP6O43824 516 aaPredicted RBP24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 MYL1P05976 194 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 ZNF484Q5JVG2 852 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 DYMQ7RTS9 669 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 TRAPPC12Q8WVT3 735 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 SYAP1Q96A49 352 aaPredicted RBP24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 PDLIM7Q9NR12 457 aa24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 BMP2KQ9NSY1 1161 aaPredicted RBP24.24■■□□□ 1.47
ECHDC3-205ENST00000496136 NPHP3-ACAD11A0A0J9YXS1 232 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 DNM1LO00429 736 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 DGAT1O75907 488 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 CABYRO75952 493 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 TFRCP02786 760 aaKnown RBP24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 SMIM10L2AP0DMW4 78 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 SMIM10L2BP0DMW5 78 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 RAD51AP2Q09MP3 1159 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 DPYDQ12882 1025 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 DNAJC19Q96DA6 116 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 DHX33Q9H6R0 707 aaKnown RBP24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 SETD4Q9NVD3 440 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 PPME1Q9Y570 386 aa24.23■■□□□ 1.47
ECHDC3-205ENST00000496136 KBTBD13C9JR72 458 aa24.22■■□□□ 1.47
ECHDC3-205ENST00000496136 USO1O60763 962 aaKnown RBP24.22■■□□□ 1.47
ECHDC3-205ENST00000496136 PPFIA1Q13136 1202 aa24.22■■□□□ 1.47
ECHDC3-205ENST00000496136 GIT2Q14161 759 aa24.22■■□□□ 1.47
ECHDC3-205ENST00000496136 NBPF20Q3BBV1 942 aa24.22■■□□□ 1.47
ECHDC3-205ENST00000496136 CNNM4Q6P4Q7 775 aa24.22■■□□□ 1.47
ECHDC3-205ENST00000496136 POLD4Q9HCU8 107 aa24.22■■□□□ 1.47
ECHDC3-205ENST00000496136 PHF24Q9UPV7 400 aa24.22■■□□□ 1.47
ECHDC3-205ENST00000496136 PCDHA5Q9Y5H7 936 aa24.22■■□□□ 1.47
ECHDC3-205ENST00000496136 NRCAMQ92823 1304 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms