RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 PRRX2Q99811 253 aa6.43□□□□□ -1.38
VPS50-219ENST00000495039 BTBD7Q9P203 1132 aa6.43□□□□□ -1.38
VPS50-219ENST00000495039 CEP72Q9P209 647 aa6.43□□□□□ -1.38
VPS50-219ENST00000495039 Q9UFV3 132 aa6.43□□□□□ -1.38
VPS50-219ENST00000495039 REXO2Q9Y3B8 237 aaKnown RBP6.43□□□□□ -1.38
VPS50-219ENST00000495039 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 PMS2P1A4D2B8 440 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 SLC26A4O43511 780 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 C4BPAP04003 597 aaKnown RBP6.42□□□□□ -1.38
VPS50-219ENST00000495039 AMY2AP04746 511 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 KRT15P19012 456 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 AMY2BP19961 511 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 CD83Q01151 205 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 TMEM200BQ69YZ2 307 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 TMPRSS6Q8IU80 811 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 CLIP3Q96DZ5 547 aa6.42□□□□□ -1.38
VPS50-219ENST00000495039 GSTA4O15217 222 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 ECE1P42892 770 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 ST5P78524 1137 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 HGFACQ04756 655 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 CRHR2Q13324 411 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 KANK2Q63ZY3 851 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 C16orf59Q7L2K0 433 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 OSTM1Q86WC4 334 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 SHCBP1Q8NEM2 672 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 TMEM176AQ96HP8 235 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 AGAP2Q99490 1192 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 OR10A5Q9H207 317 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 FAM184BQ9ULE4 1060 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 DMRT1Q9Y5R6 373 aa6.41□□□□□ -1.38
VPS50-219ENST00000495039 RAMP2O60895 175 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 CLASP2O75122 1294 aaKnown RBP6.4□□□□□ -1.38
VPS50-219ENST00000495039 PEX11BO96011 259 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 PYGMP11217 842 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 NAT1P18440 290 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 CRY1Q16526 586 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 ZNF627Q7L945 461 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 PCDH19Q8TAB3 1148 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 PTPRN2Q92932 1015 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 ZNF669Q96BR6 464 aaPredicted RBP6.4□□□□□ -1.38
VPS50-219ENST00000495039 MPHOSPH9Q99550 1183 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 AMNQ9BXJ7 453 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 CBLCQ9ULV8 474 aa6.4□□□□□ -1.38
VPS50-219ENST00000495039 KLF4O43474 513 aa6.39□□□□□ -1.39
VPS50-219ENST00000495039 MPIG6BO95866 241 aa6.39□□□□□ -1.39
VPS50-219ENST00000495039 JAM2P57087 298 aa6.39□□□□□ -1.39
VPS50-219ENST00000495039 MOGSQ13724 837 aa6.39□□□□□ -1.39
VPS50-219ENST00000495039 GRAMD4Q6IC98 578 aa6.39□□□□□ -1.39
VPS50-219ENST00000495039 PCSK4Q6UW60 755 aa6.39□□□□□ -1.39
VPS50-219ENST00000495039 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
VPS50-219ENST00000495039 UCKL1Q9NWZ5 548 aa6.39□□□□□ -1.39
VPS50-219ENST00000495039 PCDHA8Q9Y5H6 950 aa6.39□□□□□ -1.39
VPS50-219ENST00000495039 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 ARVCFO00192 962 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 GUCY1A3Q02108 690 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 RRP1BQ14684 758 aaKnown RBP6.38□□□□□ -1.39
VPS50-219ENST00000495039 FAM47CQ5HY64 1035 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 SPTY2D1Q68D10 685 aaPredicted RBP6.38□□□□□ -1.39
VPS50-219ENST00000495039 LRSAM1Q6UWE0 723 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 SCUBE1Q8IWY4 988 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 HOMEZQ8IX15 550 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 ULK2Q8IYT8 1036 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 SPATA9Q9BWV2 254 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 SLC2A4RGQ9NR83 387 aa6.38□□□□□ -1.39
VPS50-219ENST00000495039 SRGAP2CP0DJJ0 459 aa6.37□□□□□ -1.39
VPS50-219ENST00000495039 STAT5BP51692 787 aa6.37□□□□□ -1.39
VPS50-219ENST00000495039 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
VPS50-219ENST00000495039 RIN1Q13671 783 aa6.37□□□□□ -1.39
VPS50-219ENST00000495039 ANKRD35Q8N283 1001 aa6.37□□□□□ -1.39
VPS50-219ENST00000495039 AGO3Q9H9G7 860 aaKnown RBP6.37□□□□□ -1.39
VPS50-219ENST00000495039 HECAQ9UBI9 543 aaPredicted RBP6.37□□□□□ -1.39
VPS50-219ENST00000495039 CCDC66A2RUB6 948 aa6.36□□□□□ -1.39
VPS50-219ENST00000495039 MMEP08473 750 aa6.36□□□□□ -1.39
VPS50-219ENST00000495039 RABGGTAQ92696 567 aa6.36□□□□□ -1.39
VPS50-219ENST00000495039 CDC6Q99741 560 aa6.36□□□□□ -1.39
VPS50-219ENST00000495039 TTPALQ9BTX7 342 aa6.36□□□□□ -1.39
VPS50-219ENST00000495039 SMURF1Q9HCE7 757 aa6.36□□□□□ -1.39
VPS50-219ENST00000495039 A0A1W2PRX2 142 aa6.35□□□□□ -1.39
VPS50-219ENST00000495039 TMEM191CA6NGB0 347 aa6.35□□□□□ -1.39
VPS50-219ENST00000495039 KCNK3O14649 394 aa6.35□□□□□ -1.39
VPS50-219ENST00000495039 MAP3K12Q12852 859 aa6.35□□□□□ -1.39
VPS50-219ENST00000495039 RAB33AQ14088 237 aa6.35□□□□□ -1.39
VPS50-219ENST00000495039 DPY19L2P1Q6NXN4 242 aa6.35□□□□□ -1.39
VPS50-219ENST00000495039 ZNF662Q6ZS27 426 aa6.35□□□□□ -1.39
VPS50-219ENST00000495039 IPO9Q96P70 1041 aaKnown RBP6.35□□□□□ -1.39
VPS50-219ENST00000495039 VWA7Q9Y334 891 aa6.35□□□□□ -1.39
VPS50-219ENST00000495039 SH3BP1Q9Y3L3 701 aa6.35□□□□□ -1.39
VPS50-219ENST00000495039 TRBV23-1A0A0A0MS06 115 aa6.34□□□□□ -1.39
VPS50-219ENST00000495039 FOXN1O15353 648 aa6.34□□□□□ -1.39
VPS50-219ENST00000495039 KRT4P19013 534 aa6.34□□□□□ -1.39
VPS50-219ENST00000495039 DNM2P50570 870 aa6.34□□□□□ -1.39
VPS50-219ENST00000495039 ZC3H6P61129 1189 aaKnown RBP6.34□□□□□ -1.39
VPS50-219ENST00000495039 LACTBP83111 547 aaPredicted RBP6.34□□□□□ -1.39
VPS50-219ENST00000495039 SEC23AQ15436 765 aa6.34□□□□□ -1.39
VPS50-219ENST00000495039 Q6ZPA2 131 aa6.34□□□□□ -1.39
VPS50-219ENST00000495039 ZC3H7AQ8IWR0 971 aaKnown RBP6.34□□□□□ -1.39
VPS50-219ENST00000495039 HIPK4Q8NE63 616 aa6.34□□□□□ -1.39
VPS50-219ENST00000495039 CALML6Q8TD86 181 aa6.34□□□□□ -1.39
VPS50-219ENST00000495039 ASB15Q8WXK1 588 aa6.34□□□□□ -1.39
VPS50-219ENST00000495039 LPPQ93052 612 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms