RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 FBXL18Q96ME1 805 aa16.66■□□□□ 0.26
PCCB-219ENST00000494742 ERVK-5Q9HDB9 667 aa16.66■□□□□ 0.26
PCCB-219ENST00000494742 RGS18Q9NS28 235 aa16.66■□□□□ 0.26
PCCB-219ENST00000494742 ZNF318Q5VUA4 2279 aa16.66■□□□□ 0.26
PCCB-219ENST00000494742 SMCO2A6NFE2 343 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 LOC730098B7Z3J9 87 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 GPR182O15218 404 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 RPS6KA5O75582 802 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 NRIP1P48552 1158 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 CLK2P49760 499 aaKnown RBP16.65■□□□□ 0.26
PCCB-219ENST00000494742 FUT2Q10981 343 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 NFX1Q12986 1120 aaKnown RBP16.65■□□□□ 0.26
PCCB-219ENST00000494742 MCTP2Q6DN12 878 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 TYW1BQ6NUM6 668 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 KIAA0319LQ8IZA0 1049 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 CDCA3Q99618 268 aaPredicted RBP16.65■□□□□ 0.26
PCCB-219ENST00000494742 LRRC2Q9BYS8 371 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 BARHL2Q9NY43 387 aa16.65■□□□□ 0.26
PCCB-219ENST00000494742 DENND3A2RUS2 1198 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 BACH1O14867 736 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 ZBTB43O43298 467 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 CSPG5O95196 566 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 CCNE2O96020 404 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 ZNF76P36508 570 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 MRE11P49959 708 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 RCAN1P53805 252 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 CBX2Q14781 532 aaPredicted RBP16.64■□□□□ 0.25
PCCB-219ENST00000494742 RTN1Q16799 776 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 TMEM266Q2M3C6 531 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 MIS18BP1Q6P0N0 1132 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 NEK1Q96PY6 1258 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 ADAM2Q99965 735 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 ELAC1Q9H777 363 aaKnown RBP16.64■□□□□ 0.25
PCCB-219ENST00000494742 TLE6Q9H808 572 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 ZNF302Q9NR11 478 aa16.64■□□□□ 0.25
PCCB-219ENST00000494742 NOC2LQ9Y3T9 749 aaKnown RBP16.64■□□□□ 0.25
PCCB-219ENST00000494742 V9GY48 417 aaPredicted RBP16.64■□□□□ 0.25
PCCB-219ENST00000494742 C9IYK1 514 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 GLP2RO95838 553 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 ATF7P17544 494 aaPredicted RBP16.63■□□□□ 0.25
PCCB-219ENST00000494742 GATMP50440 423 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 CRYBB1P53674 252 aaPredicted RBP16.63■□□□□ 0.25
PCCB-219ENST00000494742 EXOSC10Q01780 885 aaKnown RBP16.63■□□□□ 0.25
PCCB-219ENST00000494742 PDXDC2PQ6P474 469 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 RBM23Q86U06 439 aaKnown RBP16.63■□□□□ 0.25
PCCB-219ENST00000494742 CCDC60Q8IWA6 550 aaPredicted RBP16.63■□□□□ 0.25
PCCB-219ENST00000494742 ZNF710Q8N1W2 664 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 BBXQ8WY36 941 aaPredicted RBP16.63■□□□□ 0.25
PCCB-219ENST00000494742 PGBD1Q96JS3 809 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 PRRX2Q99811 253 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 PHF7Q9BWX1 381 aaPredicted RBP16.63■□□□□ 0.25
PCCB-219ENST00000494742 TLR9Q9NR96 1032 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 TBC1D22BQ9NU19 505 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 ST3GAL5Q9UNP4 418 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 LZTS1Q9Y250 596 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 USP15Q9Y4E8 981 aaPredicted RBP16.63■□□□□ 0.25
PCCB-219ENST00000494742 EVPLQ92817 2033 aa16.63■□□□□ 0.25
PCCB-219ENST00000494742 MYH9P35579 1960 aaKnown RBP16.62■□□□□ 0.25
PCCB-219ENST00000494742 ZBTB42B2RXF5 422 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 IPO5O00410 1097 aaKnown RBP16.62■□□□□ 0.25
PCCB-219ENST00000494742 DHX15O43143 795 aaKnown RBP16.62■□□□□ 0.25
PCCB-219ENST00000494742 MGEA5O60502 916 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 FGF18O76093 207 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 CYP3A4P08684 503 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 FAM189BP81408 668 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 TSGA10IPQ3SY00 556 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 SPOUT1Q5T280 376 aaKnown RBP16.62■□□□□ 0.25
PCCB-219ENST00000494742 TRIM67Q6ZTA4 783 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 DHX32Q7L7V1 743 aaKnown RBP16.62■□□□□ 0.25
PCCB-219ENST00000494742 PLA2G4DQ86XP0 818 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 MICAL1Q8TDZ2 1067 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 TMEM40Q8WWA1 233 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 CRYGNQ8WXF5 182 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 CDHR5Q9HBB8 845 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 TMEM161AQ9NX61 479 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 BARX2Q9UMQ3 279 aaPredicted RBP16.62■□□□□ 0.25
PCCB-219ENST00000494742 GINS2Q9Y248 185 aa16.62■□□□□ 0.25
PCCB-219ENST00000494742 MAFBQ9Y5Q3 323 aaPredicted RBP16.62■□□□□ 0.25
PCCB-219ENST00000494742 TRIOO75962 3097 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 TECTAO75443 2155 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 IGLV3-22A0A075B6J6 115 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 TBKBP1A7MCY6 615 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 FAM86B1E9PN63 330 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 PPFIA3O75145 1194 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 FAM86B2P0C5J1 330 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 SRGAP2BP0DMP2 458 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 LAG3P18627 525 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 SETQ01105 290 aaPredicted RBP16.61■□□□□ 0.25
PCCB-219ENST00000494742 DUSP6Q16828 381 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 ZNF746Q6NUN9 644 aaPredicted RBP16.61■□□□□ 0.25
PCCB-219ENST00000494742 SWSAP1Q6NVH7 229 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 TMEM184AQ6ZMB5 413 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 SMAP1Q8IYB5 467 aaPredicted RBP16.61■□□□□ 0.25
PCCB-219ENST00000494742 COLGALT1Q8NBJ5 622 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 ATP6V0A4Q9HBG4 840 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 TYW1Q9NV66 732 aaKnown RBP16.61■□□□□ 0.25
PCCB-219ENST00000494742 TMEM260Q9NX78 707 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 BRPF3Q9ULD4 1205 aa16.61■□□□□ 0.25
PCCB-219ENST00000494742 CEP131Q9UPN4 1083 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms