RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 MPP3Q13368 585 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CUL1Q13616 776 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 EZH2Q15910 746 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 ADRM1Q16186 407 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ENOX2Q16206 610 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 PTPN21Q16825 1174 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CTC1Q2NKJ3 1217 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PARP6Q2NL67 630 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 LONRF3Q496Y0 759 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 EPHA10Q5JZY3 1008 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SPDYAQ5MJ70 313 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CCDC122Q5T0U0 273 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 AKNAD1Q5T1N1 836 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ERMARDQ5T6L9 678 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 KCTD16Q68DU8 428 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 OR52E8Q6IFG1 317 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 TMEM154Q6P9G4 183 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 BICDL1Q6ZP65 573 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 STOX1Q6ZVD7 989 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ASRGL1Q7L266 308 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 DHX32Q7L7V1 743 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 TRPM8Q7Z2W7 1104 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PPP1R42Q7Z4L9 355 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PIGWQ7Z7B1 504 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CROCCP2Q86T23 111 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 TBC1D1Q86TI0 1168 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 ZNF589Q86UQ0 364 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 HOOK3Q86VS8 718 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CREG2Q8IUH2 290 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 TMTC2Q8N394 836 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 OGFOD1Q8N543 542 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SAMD3Q8N6K7 520 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ZBTB8BQ8NAP8 495 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 SMC1BQ8NDV3 1235 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SPATA4Q8NEY3 305 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ASAP3Q8TDY4 903 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ATP8B4Q8TF62 1192 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 NOC3LQ8WTT2 800 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 STK32AQ8WU08 396 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SNRNP27Q8WVK2 155 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 ATXN2LQ8WWM7 1075 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 IRGQQ8WZA9 623 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PTPRN2Q92932 1015 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 TEKT1Q969V4 418 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 FAM136AQ96C01 138 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ZNF653Q96CK0 615 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 KLRG1Q96E93 195 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 TRIM47Q96LD4 638 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 FAM81BQ96LP2 452 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ZNF317Q96PQ6 595 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 XPO6Q96QU8 1125 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 RPS6KC1Q96S38 1066 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ORAI2Q96SN7 254 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 NAP1L3Q99457 506 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 MAP3K14Q99558 947 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ARPC5LQ9BPX5 153 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 FAM167BQ9BTA0 163 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 LRRC1Q9BTT6 524 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 DSCC1Q9BVC3 393 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 OXCT2Q9BYC2 517 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 PUS3Q9BZE2 481 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 TTYH3Q9C0H2 523 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 USP44Q9H0E7 712 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 RAB17Q9H0T7 212 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 BHMT2Q9H2M3 363 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 EPB41L1Q9H4G0 881 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 THAP9Q9H5L6 903 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SH2D4AQ9H788 454 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ECT2Q9H8V3 914 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PIDD1Q9HB75 910 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 TMEM165Q9HC07 324 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ARHGEF10LQ9HCE6 1279 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PPANQ9NQ55 473 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 ARHGEF3Q9NR81 526 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SAMSN1Q9NSI8 373 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 RMND1Q9NWS8 449 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 GALNT8Q9NY28 637 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 AATFQ9NY61 560 aaKnown RBP eCLIP2.97□□□□□ -1.93
MDC1-208ENST00000494654 CYP39A1Q9NYL5 469 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 AIPL1Q9NZN9 384 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 TMOD4Q9NZQ9 345 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ADAM22Q9P0K1 906 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SPATA7Q9P0W8 599 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SAMD15Q9P1V8 674 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CTTNBP2NLQ9P2B4 639 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 HDAC6Q9UBN7 1215 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PPP1R1BQ9UD71 204 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 TUBGCP4Q9UGJ1 667 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 TSPYL4Q9UJ04 414 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 TRPC5Q9UL62 973 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 PAIP2BQ9ULR5 123 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 BARX2Q9UMQ3 279 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 SYNPO2Q9UMS6 1093 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 GUCA1BQ9UMX6 200 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 DOLKQ9UPQ8 538 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ZNF148Q9UQR1 794 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ATP8A1Q9Y2Q0 1164 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 LRRC42Q9Y546 428 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PCDHA5Q9Y5H7 936 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 BZW2Q9Y6E2 419 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms