RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
RFC2-211ENST00000494019 ANO5Q75V66 913 aa11.32□□□□□ -0.6
RFC2-211ENST00000494019 LRRC8DQ7L1W4 858 aa11.32□□□□□ -0.6
RFC2-211ENST00000494019 IGSF22Q8N9C0 903 aa11.32□□□□□ -0.6
RFC2-211ENST00000494019 SNX29Q8TEQ0 813 aa11.32□□□□□ -0.6
RFC2-211ENST00000494019 CCDC43Q96MW1 224 aaKnown RBP11.32□□□□□ -0.6
RFC2-211ENST00000494019 ZNF396Q96N95 335 aaPredicted RBP11.32□□□□□ -0.6
RFC2-211ENST00000494019 HSD17B14Q9BPX1 270 aa11.32□□□□□ -0.6
RFC2-211ENST00000494019 FAM49AQ9H0Q0 323 aaPredicted RBP11.32□□□□□ -0.6
RFC2-211ENST00000494019 TUFT1Q9NNX1 390 aa11.32□□□□□ -0.6
RFC2-211ENST00000494019 STBD1O95210 358 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 BRD1O95696 1058 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 CSF2RAP15509 400 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 SELPP16109 830 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 RPA1P27694 616 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 MARCKSP29966 332 aaPredicted RBP11.31□□□□□ -0.6
RFC2-211ENST00000494019 PPIGQ13427 754 aaKnown RBP eCLIP11.31□□□□□ -0.62e-8■■■■■ 31.6
RFC2-211ENST00000494019 PDIA5Q14554 519 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 KRT79Q5XKE5 535 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 RSPH3Q86UC2 560 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 CATSPER3Q86XQ3 398 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 METTL13Q8N6R0 699 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 DNAJB3Q8WWF6 145 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 CEP170P1Q96L14 293 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 GDF15Q99988 308 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
RFC2-211ENST00000494019 NIFKQ9BYG3 293 aaKnown RBP11.31□□□□□ -0.6
RFC2-211ENST00000494019 UBE2OQ9C0C9 1292 aaKnown RBP11.31□□□□□ -0.6
RFC2-211ENST00000494019 CYP26B1Q9NR63 512 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 BMP2KQ9NSY1 1161 aaPredicted RBP11.31□□□□□ -0.6
RFC2-211ENST00000494019 PCDHA2Q9Y5H9 948 aa11.31□□□□□ -0.6
RFC2-211ENST00000494019 SMIM35A0A1B0GVV1 85 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 M0QZ92 97 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 ZBTB39O15060 712 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 MAGEB2O15479 319 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 CAND2O75155 1236 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 LYPLA2O95372 231 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 RPLP2P05387 115 aaKnown RBP11.3□□□□□ -0.6
RFC2-211ENST00000494019 IQCF3P0C7M6 154 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 SPATA31C1P0DKV0 1188 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 CDC25AP30304 524 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
RFC2-211ENST00000494019 CLCN3P51790 818 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 NPEPPSP55786 919 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 GRIN1Q05586 938 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 TMEM62Q0P6H9 643 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 STK38Q15208 465 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 TARBP2Q15633 366 aaKnown RBP11.3□□□□□ -0.6
RFC2-211ENST00000494019 OTUD6AQ7L8S5 288 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 DEFB128Q7Z7B8 93 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 LRRC71Q8N4P6 559 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 PIGOQ8TEQ8 1089 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 TFIP11Q9UBB9 837 aaKnown RBP11.3□□□□□ -0.6
RFC2-211ENST00000494019 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 KDM3AQ9Y4C1 1321 aa11.3□□□□□ -0.6
RFC2-211ENST00000494019 CEP290O15078 2479 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 A0A087WWV3 80 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 RSPH10B2B2RC85 870 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 RSPH10BP0C881 870 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 ACRP10323 421 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 NCLP19338 710 aaKnown RBP11.29□□□□□ -0.6
RFC2-211ENST00000494019 MUTP22033 750 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 TMOD1P28289 359 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 RFC2P35250 354 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 LONP1P36776 959 aaKnown RBP11.29□□□□□ -0.6
RFC2-211ENST00000494019 RARRES1P49788 294 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
RFC2-211ENST00000494019 MRPS6P82932 125 aaKnown RBP11.29□□□□□ -0.6
RFC2-211ENST00000494019 DNM1Q05193 864 aaKnown RBP11.29□□□□□ -0.6
RFC2-211ENST00000494019 SLC39A14Q15043 492 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 ZRSR1Q15695 479 aaKnown RBP11.29□□□□□ -0.6
RFC2-211ENST00000494019 EFCAB12Q6NXP0 572 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
RFC2-211ENST00000494019 LINC00301Q8NCQ3 95 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 SLC7A3Q8WY07 619 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 AK8Q96MA6 479 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 CEP89Q96ST8 783 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 MAP7D2Q96T17 732 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 PPP1R16BQ96T49 567 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 SUGCTQ9HAC7 445 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 IL23AQ9NPF7 189 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 DDX19AQ9NUU7 478 aaKnown RBP11.29□□□□□ -0.6
RFC2-211ENST00000494019 FBXO2Q9UK22 296 aaPredicted RBP11.29□□□□□ -0.6
RFC2-211ENST00000494019 AKT3Q9Y243 479 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 CDY2AQ9Y6F7 541 aa11.29□□□□□ -0.6
RFC2-211ENST00000494019 SPTLC2O15270 562 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 NBNO60934 754 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 MAFO75444 373 aaPredicted RBP11.28□□□□□ -0.6
RFC2-211ENST00000494019 PARNO95453 639 aaKnown RBP11.28□□□□□ -0.6
RFC2-211ENST00000494019 YEATS4O95619 227 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 VTNP04004 478 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 PFKMP08237 780 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 DDIT3P35638 169 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms