RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 PPME1Q9Y570 386 aa11.19□□□□□ -0.62
MACF1-222ENST00000494012 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 RSPH10B2B2RC85 870 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 M0QZ92 97 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 SLITRK3O94933 977 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 LYPLA2O95372 231 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 C22orf31O95567 290 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 RSPH10BP0C881 870 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 MUTP22033 750 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 TMOD1P28289 359 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 YWHABP31946 246 aaKnown RBP11.18□□□□□ -0.62
MACF1-222ENST00000494012 CTTNQ14247 550 aaKnown RBP11.18□□□□□ -0.62
MACF1-222ENST00000494012 SF3A1Q15459 793 aaKnown RBP11.18□□□□□ -0.62
MACF1-222ENST00000494012 ZNF618Q5T7W0 954 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 IER5Q5VY09 327 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 RUFY4Q6ZNE9 571 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 ANO5Q75V66 913 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 TDHQ8IZJ6 230 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 NME8Q8N427 588 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 WNT8BQ93098 351 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 SCLYQ96I15 445 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 JPH2Q9BR39 696 aaPredicted RBP11.18□□□□□ -0.62
MACF1-222ENST00000494012 POLR3CQ9BUI4 534 aaPredicted RBP11.18□□□□□ -0.62
MACF1-222ENST00000494012 FAM49AQ9H0Q0 323 aaPredicted RBP11.18□□□□□ -0.62
MACF1-222ENST00000494012 MTIF3Q9H2K0 278 aaKnown RBP11.18□□□□□ -0.62
MACF1-222ENST00000494012 PRO3102Q9H379 93 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 CYP26B1Q9NR63 512 aa11.18□□□□□ -0.62
MACF1-222ENST00000494012 COLQQ9Y215 455 aaPredicted RBP11.18□□□□□ -0.62
MACF1-222ENST00000494012 VWA3AA6NCI4 1184 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 F13A1P00488 732 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 CTSHP09668 335 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 ACTN1P12814 892 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 XRCC6P12956 609 aaKnown RBP eCLIP11.17□□□□□ -0.62
MACF1-222ENST00000494012 RPA1P27694 616 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 ANP32AP39687 249 aaKnown RBP11.17□□□□□ -0.62
MACF1-222ENST00000494012 RFC5P40937 340 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 MRPS6P82932 125 aaKnown RBP11.17□□□□□ -0.62
MACF1-222ENST00000494012 TARBP2Q15633 366 aaKnown RBP11.17□□□□□ -0.62
MACF1-222ENST00000494012 MTERF2Q49AM1 385 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 FAM26DQ5JW98 314 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 KRT79Q5XKE5 535 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 CATSPER3Q86XQ3 398 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 ZNF710Q8N1W2 664 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 METTL13Q8N6R0 699 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 DNAJB3Q8WWF6 145 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 SLC7A3Q8WY07 619 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 CEP170P1Q96L14 293 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 AK8Q96MA6 479 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 ZNF396Q96N95 335 aaPredicted RBP11.17□□□□□ -0.62
MACF1-222ENST00000494012 MAP7D2Q96T17 732 aa11.17□□□□□ -0.62
MACF1-222ENST00000494012 WRAP73Q9P2S5 460 aaPredicted RBP11.17□□□□□ -0.62
MACF1-222ENST00000494012 KDM3AQ9Y4C1 1321 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 GAS2O43903 313 aaKnown RBP11.16□□□□□ -0.62
MACF1-222ENST00000494012 STBD1O95210 358 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 SPATA31C1P0DKV0 1188 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 LONP1P36776 959 aaKnown RBP11.16□□□□□ -0.62
MACF1-222ENST00000494012 CCT6AP40227 531 aaKnown RBP11.16□□□□□ -0.62
MACF1-222ENST00000494012 DNM2P50570 870 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 POLGP54098 1239 aaPredicted RBP11.16□□□□□ -0.62
MACF1-222ENST00000494012 XKR9Q5GH70 373 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 PLA2G4FQ68DD2 849 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 ATL3Q6DD88 541 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 EFCAB12Q6NXP0 572 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 DEFB128Q7Z7B8 93 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 KCTD17Q8N5Z5 321 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 SNX29Q8TEQ0 813 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 ZBTB10Q96DT7 871 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 NACC1Q96RE7 527 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 FTOQ9C0B1 505 aaKnown RBP eCLIP11.16□□□□□ -0.62
MACF1-222ENST00000494012 ANKEF1Q9NU02 776 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
MACF1-222ENST00000494012 TRIOBPQ9H2D6 2365 aa11.16□□□□□ -0.62
MACF1-222ENST00000494012 TMEM150BA6NC51 233 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 SLC26A4O43511 780 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 MAFO75444 373 aaPredicted RBP11.15□□□□□ -0.62
MACF1-222ENST00000494012 MED24O75448 989 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 BAIAP3O94812 1187 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 FGBP02675 491 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 CXCL10P02778 98 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 EPHB4P54760 987 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 CDC42EP1Q00587 391 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 IL17AQ16552 155 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 ZNF365Q70YC5 407 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 RNPC3Q96LT9 517 aaKnown RBP11.15□□□□□ -0.62
MACF1-222ENST00000494012 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.15□□□□□ -0.62
MACF1-222ENST00000494012 NT5C3AQ9H0P0 336 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 SUGCTQ9HAC7 445 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 DBR1Q9UK59 544 aaKnown RBP11.15□□□□□ -0.62
MACF1-222ENST00000494012 AKT3Q9Y243 479 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 ATP6V1DQ9Y5K8 247 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 TRPV2Q9Y5S1 764 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 CLIC4Q9Y696 253 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 CDY2AQ9Y6F7 541 aa11.15□□□□□ -0.62
MACF1-222ENST00000494012 MORC2Q9Y6X9 1032 aaPredicted RBP11.15□□□□□ -0.62
MACF1-222ENST00000494012 MICAL3Q7RTP6 2002 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms