RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 CDH23Q9H251 3354 aa18.16■□□□□ 0.5
SATB1-217ENST00000493952 TTC3P53804 2025 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 ABHD14A-ACY1A0A1B0GW23 586 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 TMEM150BA6NC51 233 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 GHRP10912 638 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 TXKP42681 527 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 KCNJ6P48051 423 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 PSMC5P62195 406 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 DEFB103AP81534 67 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
SATB1-217ENST00000493952 CUL4AQ13619 759 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 IKBKEQ14164 716 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 LPIN1Q14693 890 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 EPHA7Q15375 998 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 FBXO47Q5MNV8 452 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 TTC38Q5R3I4 469 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 IER5Q5VY09 327 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 KIAA0319LQ8IZA0 1049 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 FAM161BQ96MY7 647 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 TTC12Q9H892 705 aaPredicted RBP18.15■□□□□ 0.5
SATB1-217ENST00000493952 WRAP73Q9P2S5 460 aaPredicted RBP18.15■□□□□ 0.5
SATB1-217ENST00000493952 PCDHA12Q9UN75 941 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 YBX2Q9Y2T7 364 aaKnown RBP18.15■□□□□ 0.5
SATB1-217ENST00000493952 TRPV2Q9Y5S1 764 aa18.15■□□□□ 0.5
SATB1-217ENST00000493952 COL4A4P53420 1690 aaPredicted RBP18.15■□□□□ 0.5
SATB1-217ENST00000493952 KIAA1671Q9BY89 1806 aa18.14■□□□□ 0.5
SATB1-217ENST00000493952 QARSP47897 775 aaKnown RBP18.14■□□□□ 0.49
SATB1-217ENST00000493952 ORC2Q13416 577 aaPredicted RBP18.14■□□□□ 0.49
SATB1-217ENST00000493952 NBR1Q14596 966 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 TARBP2Q15633 366 aaKnown RBP18.14■□□□□ 0.49
SATB1-217ENST00000493952 ZNF174Q15697 407 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 RAB30Q15771 203 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 XKR3Q5GH77 459 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 TMCO2Q7Z6W1 182 aaPredicted RBP18.14■□□□□ 0.49
SATB1-217ENST00000493952 NME8Q8N427 588 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 METTL13Q8N6R0 699 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 PHOSPHO2Q8TCD6 241 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 SEPT8Q92599 483 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 TIFAQ96CG3 184 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 NIFKQ9BYG3 293 aaKnown RBP18.14■□□□□ 0.49
SATB1-217ENST00000493952 IFIH1Q9BYX4 1025 aaKnown RBP18.14■□□□□ 0.49
SATB1-217ENST00000493952 CELF4Q9BZC1 486 aaKnown RBP18.14■□□□□ 0.49
SATB1-217ENST00000493952 MTMR10Q9NXD2 777 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 NOL7Q9UMY1 257 aaKnown RBP18.14■□□□□ 0.49
SATB1-217ENST00000493952 RALGAPA2Q2PPJ7 1873 aa18.14■□□□□ 0.49
SATB1-217ENST00000493952 TMEM265A0A087WTH1 108 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 M0QZ92 97 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 MAGEB2O15479 319 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 EFCAB14O75071 495 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 P4HBP07237 508 aaKnown RBP18.13■□□□□ 0.49
SATB1-217ENST00000493952 MYOGP15173 224 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 TRAPPC10P48553 1259 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 TOB1P50616 345 aaPredicted RBP18.13■□□□□ 0.49
SATB1-217ENST00000493952 CLCN3P51790 818 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 MTERF2Q49AM1 385 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 MCTP1Q6DN14 999 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.13■□□□□ 0.49
SATB1-217ENST00000493952 ANO5Q75V66 913 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 HERC6Q8IVU3 1022 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 LRRC71Q8N4P6 559 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 LINC01465Q8N7H1 131 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 DYDC2Q96IM9 177 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 CEP89Q96ST8 783 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 SH2D3AQ9BRG2 576 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 LXNQ9BS40 222 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 NKX2-4Q9H2Z4 354 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 AGO3Q9H9G7 860 aaKnown RBP18.13■□□□□ 0.49
SATB1-217ENST00000493952 RGL1Q9NZL6 768 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 MSRAQ9UJ68 235 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 PCDHA11Q9Y5I1 949 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 KDM3AQ9Y4C1 1321 aa18.13■□□□□ 0.49
SATB1-217ENST00000493952 POTEMA6NI47 508 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 H3BQV1 296 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 CYP4A11Q02928 519 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 TBC1D8BQ0IIM8 1120 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 PLA2G4FQ68DD2 849 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 EFCAB12Q6NXP0 572 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 TSHZ1Q6ZSZ6 1077 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 APBB2Q92870 758 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 GUCD1Q96NT3 240 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 PPP1R16BQ96T49 567 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 SEMA6BQ9H3T3 888 aa18.12■□□□□ 0.49
SATB1-217ENST00000493952 DDX11L8A8MPP1 907 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 DKC1O60832 514 aaKnown RBP eCLIP18.11■□□□□ 0.49
SATB1-217ENST00000493952 VTNP04004 478 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 OR52Z1P0C646 297 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 CD52P31358 61 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 CTTNQ14247 550 aaKnown RBP18.11■□□□□ 0.49
SATB1-217ENST00000493952 LARP1BQ659C4 914 aaKnown RBP18.11■□□□□ 0.49
SATB1-217ENST00000493952 C4orf19Q8IY42 314 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 EIF2AK1Q9BQI3 630 aaKnown RBP18.11■□□□□ 0.49
SATB1-217ENST00000493952 ZNF576Q9H609 170 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 CDHR5Q9HBB8 845 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 GINS2Q9Y248 185 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 PCDHB6Q9Y5E3 794 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 SQORQ9Y6N5 450 aa18.11■□□□□ 0.49
SATB1-217ENST00000493952 FNDC1Q4ZHG4 1894 aaPredicted RBP18.11■□□□□ 0.49
SATB1-217ENST00000493952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.1■□□□□ 0.49
SATB1-217ENST00000493952 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
SATB1-217ENST00000493952 SLITRK3O94933 977 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms