RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 RAB30Q15771 203 aa15.4■□□□□ 0.06
PDCD11-206ENST00000493610 TRMT1LQ7Z2T5 733 aaKnown RBP15.4■□□□□ 0.06
PDCD11-206ENST00000493610 MIER3Q7Z3K6 550 aa15.4■□□□□ 0.06
PDCD11-206ENST00000493610 RTN4RL1Q86UN2 441 aaPredicted RBP15.4■□□□□ 0.06
PDCD11-206ENST00000493610 TMEM40Q8WWA1 233 aa15.4■□□□□ 0.06
PDCD11-206ENST00000493610 FAM20AQ96MK3 541 aa15.4■□□□□ 0.06
PDCD11-206ENST00000493610 MTMR9Q96QG7 549 aa15.4■□□□□ 0.06
PDCD11-206ENST00000493610 GPR32O75388 356 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 GJB5O95377 273 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 CA3P07451 260 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 TAP1Q03518 808 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 IKBKEQ14164 716 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 CRIPAKQ8N1N5 446 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 BANK1Q8NDB2 785 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 C8orf76Q96K31 380 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 NIFKQ9BYG3 293 aaKnown RBP15.39■□□□□ 0.05
PDCD11-206ENST00000493610 IFIH1Q9BYX4 1025 aaKnown RBP15.39■□□□□ 0.05
PDCD11-206ENST00000493610 SAMM50Q9Y512 469 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 GTF3C3Q9Y5Q9 886 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 TRPV2Q9Y5S1 764 aa15.39■□□□□ 0.05
PDCD11-206ENST00000493610 HMGN5P82970 282 aaKnown RBP15.38■□□□□ 0.05
PDCD11-206ENST00000493610 HTRA4P83105 476 aaPredicted RBP15.38■□□□□ 0.05
PDCD11-206ENST00000493610 DRP2Q13474 957 aa15.38■□□□□ 0.05
PDCD11-206ENST00000493610 ANO5Q75V66 913 aa15.38■□□□□ 0.05
PDCD11-206ENST00000493610 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
PDCD11-206ENST00000493610 SEPT8Q92599 483 aa15.38■□□□□ 0.05
PDCD11-206ENST00000493610 SH2D3AQ9BRG2 576 aa15.38■□□□□ 0.05
PDCD11-206ENST00000493610 CELF4Q9BZC1 486 aaKnown RBP15.38■□□□□ 0.05
PDCD11-206ENST00000493610 TMX1Q9H3N1 280 aa15.38■□□□□ 0.05
PDCD11-206ENST00000493610 MSRAQ9UJ68 235 aa15.38■□□□□ 0.05
PDCD11-206ENST00000493610 ARID2Q68CP9 1835 aa15.38■□□□□ 0.05
PDCD11-206ENST00000493610 TTC3P53804 2025 aa15.38■□□□□ 0.05
PDCD11-206ENST00000493610 IGKV6-21A0A0C4DH24 114 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 CD52P31358 61 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 TOB1P50616 345 aaPredicted RBP15.37■□□□□ 0.05
PDCD11-206ENST00000493610 CLCN3P51790 818 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 TSHZ1Q6ZSZ6 1077 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 CKAP2LQ8IYA6 745 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 NME8Q8N427 588 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 C4orf32Q8N8J7 132 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 ADAMTS10Q9H324 1103 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 FOXP1Q9H334 677 aaPredicted RBP15.37■□□□□ 0.05
PDCD11-206ENST00000493610 PRDM12Q9H4Q4 367 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 BRMS1Q9HCU9 246 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 RGL1Q9NZL6 768 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 SQORQ9Y6N5 450 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 COL4A4P53420 1690 aaPredicted RBP15.37■□□□□ 0.05
PDCD11-206ENST00000493610 REV3LO60673 3130 aa15.37■□□□□ 0.05
PDCD11-206ENST00000493610 RFXAPO00287 272 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 ENPP3O14638 875 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 ZBTB39O15060 712 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 ST18O60284 1047 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 EFCAB14O75071 495 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 VTNP04004 478 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 LINC00271P0C7V0 271 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 U2AF2P26368 475 aaKnown RBP eCLIP15.36■□□□□ 0.057e-7■■■■■ 28.3
PDCD11-206ENST00000493610 KCNJ6P48051 423 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 EPHA7Q15375 998 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 XKR3Q5GH77 459 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 RSPH3Q86UC2 560 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 LRRC71Q8N4P6 559 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
PDCD11-206ENST00000493610 APBB2Q92870 758 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 TNPO1Q92973 898 aaKnown RBP15.36■□□□□ 0.05
PDCD11-206ENST00000493610 TOP1MTQ969P6 601 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 FAM167AQ96KS9 214 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 NAP1L4Q99733 375 aaKnown RBP15.36■□□□□ 0.05
PDCD11-206ENST00000493610 RC3H2Q9HBD1 1191 aaKnown RBP15.36■□□□□ 0.05
PDCD11-206ENST00000493610 ERVK-5Q9HDB9 667 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 PADI3Q9ULW8 664 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 NOC2LQ9Y3T9 749 aaKnown RBP15.36■□□□□ 0.05
PDCD11-206ENST00000493610 TRANK1O15050 2925 aa15.36■□□□□ 0.05
PDCD11-206ENST00000493610 MYO9BQ13459 2157 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 MGEA5O60502 916 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 LPXNO60711 386 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 PSMC5P62195 406 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 TRIM29Q14134 588 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 NBR1Q14596 966 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 TMEM266Q2M3C6 531 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 IER5Q5VY09 327 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 PPP2R2DQ66LE6 453 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 PLA2G4FQ68DD2 849 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 EFCAB12Q6NXP0 572 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 FAM117BQ6P1L5 589 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 USP38Q8NB14 1042 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 DYDC2Q96IM9 177 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 PPP1R16BQ96T49 567 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 HSD17B14Q9BPX1 270 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 SLC28A3Q9HAS3 691 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 NRBP2Q9NSY0 501 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 TCEAL9Q9UHQ7 104 aa15.35■□□□□ 0.05
PDCD11-206ENST00000493610 LINC01553A4QN01 128 aa15.34■□□□□ 0.05
PDCD11-206ENST00000493610 MAGEB2O15479 319 aa15.34■□□□□ 0.05
PDCD11-206ENST00000493610 TLL1O43897 1013 aa15.34■□□□□ 0.05
PDCD11-206ENST00000493610 NEMFO60524 1076 aa15.34■□□□□ 0.05
PDCD11-206ENST00000493610 SLITRK3O94933 977 aa15.34■□□□□ 0.05
PDCD11-206ENST00000493610 RPLP2P05387 115 aaKnown RBP15.34■□□□□ 0.05
PDCD11-206ENST00000493610 MCM7P33993 719 aa15.34■□□□□ 0.05
PDCD11-206ENST00000493610 QARSP47897 775 aaKnown RBP15.34■□□□□ 0.05
PDCD11-206ENST00000493610 NPEPPSP55786 919 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms