RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 DIRC2Q96SL1 478 aa6.56□□□□□ -1.36
CCNB3-208ENST00000493507 MRPL4Q9BYD3 311 aaKnown RBP6.56□□□□□ -1.36
CCNB3-208ENST00000493507 ZNF552Q9H707 407 aaPredicted RBP6.56□□□□□ -1.36
CCNB3-208ENST00000493507 DCP1AQ9NPI6 582 aaPredicted RBP6.56□□□□□ -1.36
CCNB3-208ENST00000493507 NUDT5Q9UKK9 219 aa6.56□□□□□ -1.36
CCNB3-208ENST00000493507 RNF114Q9Y508 228 aa6.56□□□□□ -1.36
CCNB3-208ENST00000493507 KIF24Q5T7B8 1368 aa6.56□□□□□ -1.36
CCNB3-208ENST00000493507 ZNF831Q5JPB2 1677 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 CGNL1Q0VF96 1302 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 IGSF1Q8N6C5 1336 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 EFCAB14O75071 495 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 DBHP09172 617 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 C6orf222P0C671 652 aaPredicted RBP6.55□□□□□ -1.36
CCNB3-208ENST00000493507 SDHBP21912 280 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 YBX1P67809 324 aaKnown RBP6.55□□□□□ -1.36
CCNB3-208ENST00000493507 GPR162Q16538 588 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 WWC2Q6AWC2 1192 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 RIOX2Q8IUF8 465 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 TEX2Q8IWB9 1127 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 APPBP2Q92624 585 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 ALG1Q9BT22 464 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 CLDND1Q9NY35 253 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 DBR1Q9UK59 544 aaKnown RBP6.55□□□□□ -1.36
CCNB3-208ENST00000493507 COA3Q9Y2R0 106 aaPredicted RBP6.55□□□□□ -1.36
CCNB3-208ENST00000493507 TMA7Q9Y2S6 64 aaKnown RBP6.55□□□□□ -1.36
CCNB3-208ENST00000493507 MRPL42Q9Y6G3 142 aaKnown RBP6.55□□□□□ -1.36
CCNB3-208ENST00000493507 X6R8D5 127 aa6.55□□□□□ -1.36
CCNB3-208ENST00000493507 KDM3BQ7LBC6 1761 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 PNPLA7Q6ZV29 1317 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 TLDC2A0PJX2 215 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 NUDT19A8MXV4 375 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 PLD2O14939 933 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 CYP27B1O15528 508 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 MSCO60682 206 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 PEX10O60683 326 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 IL2RBP14784 551 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 YBX3P16989 372 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCNB3-208ENST00000493507 MAPKAPK2P49137 400 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 AMPHP49418 695 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 ZNF605Q86T29 641 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 JAZF1Q86VZ6 243 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 AMIGO3Q86WK7 504 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 PEX11GQ96HA9 241 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 KANSL2Q9H9L4 492 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 NCOA5Q9HCD5 579 aaKnown RBP6.54□□□□□ -1.36
CCNB3-208ENST00000493507 KLHL14Q9P2G3 628 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 FBLN5Q9UBX5 448 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 SFMBT1Q9UHJ3 866 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 TRAF6Q9Y4K3 522 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 KCPQ6ZWJ8 1503 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 KDRP35968 1356 aa6.54□□□□□ -1.36
CCNB3-208ENST00000493507 ESYT3A0FGR9 886 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 F8W031 263 aaPredicted RBP6.53□□□□□ -1.36
CCNB3-208ENST00000493507 DGKIO75912 1065 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 FARP2O94887 1054 aaPredicted RBP6.53□□□□□ -1.36
CCNB3-208ENST00000493507 NTRK1P04629 796 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 FPR2P25090 351 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 SLC9A5Q14940 896 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 TCEA2Q15560 299 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 TRIM61Q5EBN2 209 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 RPTNQ6XPR3 784 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 NLRP10Q86W26 655 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 DCP2Q8IU60 420 aaKnown RBP6.53□□□□□ -1.36
CCNB3-208ENST00000493507 FBXO15Q8NCQ5 510 aaPredicted RBP6.53□□□□□ -1.36
CCNB3-208ENST00000493507 AP5M1Q9H0R1 490 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 NDOR1Q9UHB4 597 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 NPC1L1Q9UHC9 1359 aa6.53□□□□□ -1.36
CCNB3-208ENST00000493507 ZC3H12DA2A288 527 aaKnown RBP6.52□□□□□ -1.37
CCNB3-208ENST00000493507 CDC45O75419 566 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 IL13P35225 146 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 SLC6A11P48066 632 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 GUCY1A3Q02108 690 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 PAK1Q13153 545 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 FNDC3BQ53EP0 1204 aaKnown RBP6.52□□□□□ -1.37
CCNB3-208ENST00000493507 CC2D1BQ5T0F9 858 aaKnown RBP6.52□□□□□ -1.37
CCNB3-208ENST00000493507 GIMAP6Q6P9H5 292 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 ZC3H14Q6PJT7 736 aaKnown RBP6.52□□□□□ -1.37
CCNB3-208ENST00000493507 C16orf86Q6ZW13 317 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 SMIM5Q71RC9 77 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 MTDHQ86UE4 582 aaKnown RBP6.52□□□□□ -1.37
CCNB3-208ENST00000493507 COL23A1Q86Y22 540 aaPredicted RBP6.52□□□□□ -1.37
CCNB3-208ENST00000493507 GSTCDQ8NEC7 633 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 MAGEB10Q96LZ2 347 aaPredicted RBP6.52□□□□□ -1.37
CCNB3-208ENST00000493507 FMNL2Q96PY5 1086 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 EPB41L1Q9H4G0 881 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 FANCLQ9NW38 375 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 SIRT5Q9NXA8 310 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 FBXL7Q9UJT9 491 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 MAP3K5Q99683 1374 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 CHD4Q14839 1912 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 LAMB4A4D0S4 1761 aa6.52□□□□□ -1.37
CCNB3-208ENST00000493507 TEX51A0A1B0GUA7 166 aa6.51□□□□□ -1.37
CCNB3-208ENST00000493507 FAM47E-STBD1D6RA91 191 aa6.51□□□□□ -1.37
CCNB3-208ENST00000493507 PPM1GO15355 546 aaPredicted RBP6.51□□□□□ -1.37
CCNB3-208ENST00000493507 ASMTLO95671 621 aa6.51□□□□□ -1.37
CCNB3-208ENST00000493507 SOD2P04179 222 aa6.51□□□□□ -1.37
CCNB3-208ENST00000493507 GRK2P25098 689 aa6.51□□□□□ -1.37
CCNB3-208ENST00000493507 VIPR1P32241 457 aa6.51□□□□□ -1.37
CCNB3-208ENST00000493507 GRK3P35626 688 aa6.51□□□□□ -1.37
CCNB3-208ENST00000493507 SRSF3P84103 164 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms