RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 HERVK_113P62684 666 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 NOLC1Q14978 699 aaKnown RBP eCLIP4.96□□□□□ -1.62
PTCD3-218ENST00000493430 NRN1LQ496H8 165 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 FOXB2Q5VYV0 432 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 RNF207Q6ZRF8 634 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 WDR48Q8TAF3 677 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 WNK4Q96J92 1243 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 PCED1AQ9H1Q7 454 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 PCDHA9Q9Y5H5 950 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 ABCA10Q8WWZ4 1543 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 GAPVD1Q14C86 1478 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 PRAMEF25A6NGN4 478 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 ZNF561-AS1K7EIQ3 104 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 CLASP2O75122 1294 aaKnown RBP4.95□□□□□ -1.62
PTCD3-218ENST00000493430 C4BPAP04003 597 aaKnown RBP4.95□□□□□ -1.62
PTCD3-218ENST00000493430 APPP05067 770 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 ACO1P21399 889 aaKnown RBP4.95□□□□□ -1.62
PTCD3-218ENST00000493430 AOAHP28039 575 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 DNM2P50570 870 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 KCNQ1P51787 676 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 IL13RA1P78552 427 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 LACTBP83111 547 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-218ENST00000493430 STILQ15468 1287 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 USP39Q53GS9 565 aaKnown RBP4.95□□□□□ -1.62
PTCD3-218ENST00000493430 NBPF6Q5VWK0 638 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 POLNQ7Z5Q5 900 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 ZC3H7AQ8IWR0 971 aaKnown RBP4.95□□□□□ -1.62
PTCD3-218ENST00000493430 FAM89AQ96GI7 184 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 NBPF4Q96M43 638 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 DPYSL5Q9BPU6 564 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 DHRS4Q9BTZ2 278 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 BTBD2Q9BX70 525 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 C12orf65Q9H3J6 166 aaKnown RBP4.95□□□□□ -1.62
PTCD3-218ENST00000493430 BTBD7Q9P203 1132 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 PUF60Q9UHX1 559 aaKnown RBP4.95□□□□□ -1.62
PTCD3-218ENST00000493430 SLC30A1Q9Y6M5 507 aa4.95□□□□□ -1.62
PTCD3-218ENST00000493430 CCDC66A2RUB6 948 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 NPIPB8E9PQR5 432 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 ARHGAP6O43182 974 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 DIAPH1O60610 1272 aaKnown RBP4.94□□□□□ -1.62
PTCD3-218ENST00000493430 CRTAMO95727 393 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 FAM153BP0C7A2 387 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 RPS19P39019 145 aaKnown RBP4.94□□□□□ -1.62
PTCD3-218ENST00000493430 ADCY8P40145 1251 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 ZC3H6P61129 1189 aaKnown RBP4.94□□□□□ -1.62
PTCD3-218ENST00000493430 KLF10Q13118 480 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 NFYCQ13952 458 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 EIF4HQ15056 248 aaKnown RBP4.94□□□□□ -1.62
PTCD3-218ENST00000493430 LONRF2Q1L5Z9 754 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 MIIPQ5JXC2 388 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 Q6ZSN1 163 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 ZNF503Q96F45 646 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 EXOC2Q96KP1 924 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 OR14A2Q96R54 314 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 SLITRK6Q9H5Y7 841 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 SMURF1Q9HCE7 757 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 MSL2Q9HCI7 577 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 IGSF5Q9NSI5 407 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 SIRPGQ9P1W8 387 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 WRNQ14191 1432 aaPredicted RBP eCLIP4.94□□□□□ -1.62
PTCD3-218ENST00000493430 GRIN2AQ12879 1464 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 GRIN2BQ13224 1484 aa4.94□□□□□ -1.62
PTCD3-218ENST00000493430 MAGI1Q96QZ7 1491 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-218ENST00000493430 KCNK3O14649 394 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 ATP2B1P20020 1258 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 ECE1P42892 770 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 MEOX1P50221 254 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 ZC3H12BQ5HYM0 836 aaKnown RBP4.93□□□□□ -1.62
PTCD3-218ENST00000493430 TRIM68Q6AZZ1 485 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 USP30Q70CQ3 517 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 OTOP2Q7RTS6 562 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 EXTL1Q92935 676 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 MENTQ9BUN1 341 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 PLA2G12BQ9BX93 195 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 CSRNP2Q9H175 543 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 UCKL1Q9NWZ5 548 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 CDC42EP3Q9UKI2 254 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 MRPS23Q9Y3D9 190 aaKnown RBP4.93□□□□□ -1.62
PTCD3-218ENST00000493430 SYNJ2O15056 1496 aa4.93□□□□□ -1.62
PTCD3-218ENST00000493430 A0A0G2JNJ9 132 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 MATN2O00339 956 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 PLSCR1O15162 318 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 MC4RP32245 332 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 CD83Q01151 205 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 TBR1Q16650 682 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 NAALADL2Q58DX5 795 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 MAMDC4Q6UXC1 1216 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 LARP4Q71RC2 724 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTCD3-218ENST00000493430 C1orf210Q8IVY1 113 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 AMNQ9BXJ7 453 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 KIAA1683Q9H0B3 1180 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 OR10A5Q9H207 317 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 OR10A2Q9H208 303 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 Q9UFV3 132 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 ING1Q9UK53 422 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-218ENST00000493430 ADCY10Q96PN6 1610 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 KDM2BQ8NHM5 1336 aa4.92□□□□□ -1.62
PTCD3-218ENST00000493430 E9PSI1 815 aa4.91□□□□□ -1.62
PTCD3-218ENST00000493430 SCDO00767 359 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms