RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 GINS2Q9Y248 185 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 RWDD3Q9Y3V2 267 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 CYP46A1Q9Y6A2 500 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 ATG2AQ2TAZ0 1938 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 PSAPP07602 524 aa25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 NLRP5P59047 1200 aa25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 LEXMQ3ZCV2 418 aa25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 TCEAL5Q5H9L2 206 aa25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 BBXQ8WY36 941 aaPredicted RBP25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 LARP6Q9BRS8 491 aaKnown RBP25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 C11orf84Q9BUA3 381 aaPredicted RBP25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 UPF3BQ9BZI7 483 aaKnown RBP25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 TCEAL9Q9UHQ7 104 aa25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 PCDHA10Q9Y5I2 948 aa25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 WDR81Q562E7 1941 aa25.1■■□□□ 1.61
LYSMD4-208ENST00000493256 GRM6O15303 877 aa25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 C22orf31O95567 290 aa25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 TRMT1LQ7Z2T5 733 aaKnown RBP25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 TRIM22Q8IYM9 498 aa25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 TMEM40Q8WWA1 233 aa25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 TM6SF1Q9BZW5 370 aa25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 NSUN3Q9H649 340 aaKnown RBP25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 ERVK-5Q9HDB9 667 aa25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 GABBR1Q9UBS5 961 aa25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 NOC2LQ9Y3T9 749 aaKnown RBP25.09■■□□□ 1.61
LYSMD4-208ENST00000493256 MSH4O15457 936 aa25.08■■□□□ 1.61
LYSMD4-208ENST00000493256 SSRP1Q08945 709 aaKnown RBP25.08■■□□□ 1.61
LYSMD4-208ENST00000493256 NFX1Q12986 1120 aaKnown RBP25.08■■□□□ 1.61
LYSMD4-208ENST00000493256 CMTR2Q8IYT2 770 aaKnown RBP25.08■■□□□ 1.61
LYSMD4-208ENST00000493256 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.08■■□□□ 1.61
LYSMD4-208ENST00000493256 ZNF274Q96GC6 653 aaPredicted RBP25.08■■□□□ 1.61
LYSMD4-208ENST00000493256 SAMM50Q9Y512 469 aa25.08■■□□□ 1.61
LYSMD4-208ENST00000493256 MRPL42Q9Y6G3 142 aaKnown RBP25.08■■□□□ 1.61
LYSMD4-208ENST00000493256 KIAA1671Q9BY89 1806 aa25.07■■□□□ 1.6
LYSMD4-208ENST00000493256 WDR64B1ANS9 1081 aa25.07■■□□□ 1.6
LYSMD4-208ENST00000493256 MGEA5O60502 916 aa25.07■■□□□ 1.6
LYSMD4-208ENST00000493256 STAG3L1P0CL83 205 aa25.07■■□□□ 1.6
LYSMD4-208ENST00000493256 USP11P51784 963 aa25.07■■□□□ 1.6
LYSMD4-208ENST00000493256 PPP1R16BQ96T49 567 aa25.07■■□□□ 1.6
LYSMD4-208ENST00000493256 CPLX1O14810 134 aa25.06■■□□□ 1.6
LYSMD4-208ENST00000493256 RPS6KA5O75582 802 aa25.06■■□□□ 1.6
LYSMD4-208ENST00000493256 COL19A1Q14993 1142 aa25.06■■□□□ 1.6
LYSMD4-208ENST00000493256 KIZQ2M2Z5 673 aa25.06■■□□□ 1.6
LYSMD4-208ENST00000493256 PAN2Q504Q3 1202 aaKnown RBP25.06■■□□□ 1.6
LYSMD4-208ENST00000493256 TBCKQ8TEA7 893 aa25.06■■□□□ 1.6
LYSMD4-208ENST00000493256 LMAN2LQ9H0V9 348 aa25.06■■□□□ 1.6
LYSMD4-208ENST00000493256 PCDHA4Q9UN74 947 aa25.06■■□□□ 1.6
LYSMD4-208ENST00000493256 ZNF862O60290 1169 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 VTNP04004 478 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 SARSP49591 514 aaKnown RBP25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 GATMP50440 423 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 STK3Q13188 491 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 METTL13Q8N6R0 699 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 NEK9Q8TD19 979 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 SLC5A5Q92911 643 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 GJA10Q969M2 543 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 PABPC5Q96DU9 382 aaKnown RBP25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 FAM167AQ96KS9 214 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 RIT2Q99578 217 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 OSMRQ99650 979 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 PLVAPQ9BX97 442 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 DISC1Q9NRI5 854 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 ST3GAL5Q9UNP4 418 aa25.05■■□□□ 1.6
LYSMD4-208ENST00000493256 H3BQ06 376 aaPredicted RBP25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 GAS7O60861 476 aa25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 DEXIO95424 95 aa25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 IBSPP21815 317 aaPredicted RBP25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 CLCN3P51790 818 aa25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 CRYBB1P53674 252 aaPredicted RBP25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 NPY5RQ15761 445 aa25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 PTCRAQ6ISU1 281 aaPredicted RBP25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 AIFM3Q96NN9 605 aa25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 ALG13Q9NP73 1137 aaKnown RBP25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 PDRG1Q9NUG6 133 aa25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 LRFN2Q9ULH4 789 aa25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 CEP131Q9UPN4 1083 aa25.04■■□□□ 1.6
LYSMD4-208ENST00000493256 M0R2N6 131 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 GPR182O15218 404 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 CHMP2AO43633 222 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 GPR32O75388 356 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 MMP1P03956 469 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 NEFLP07196 543 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 COL9A1P20849 921 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 UGCGQ16739 394 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 ODR4Q5SWX8 454 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 LRCH2Q5VUJ6 765 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 FAM43BQ6ZT52 329 aaPredicted RBP25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 FAM228AQ86W67 206 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 BLIDQ8IZY5 108 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 LINC01465Q8N7H1 131 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 DAGLBQ8NCG7 672 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 P2RX5Q93086 422 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 ADAM2Q99965 735 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 TEKT3Q9BXF9 490 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 C22orf23Q9BZE7 217 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 UNC45AQ9H3U1 944 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 CD320Q9NPF0 282 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 RGS18Q9NS28 235 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 PLAGL2Q9UPG8 496 aa25.03■■□□□ 1.6
LYSMD4-208ENST00000493256 DENND3A2RUS2 1198 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms