RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 C4orf32Q8N8J7 132 aa14.33□□□□□ -0.12
CLIP2-209ENST00000493166 NIFKQ9BYG3 293 aaKnown RBP14.33□□□□□ -0.12
CLIP2-209ENST00000493166 MTIF3Q9H2K0 278 aaKnown RBP14.33□□□□□ -0.12
CLIP2-209ENST00000493166 ZSWIM4Q9H7M6 989 aa14.33□□□□□ -0.12
CLIP2-209ENST00000493166 TMEM150BA6NC51 233 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 M0QZ92 97 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 MAGEB2O15479 319 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 NBNO60934 754 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 ACTN1P12814 892 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 PRPHP41219 470 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
CLIP2-209ENST00000493166 TBC1D8BQ0IIM8 1120 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 RESTQ13127 1097 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 MBTPS1Q14703 1052 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 FAM26DQ5JW98 314 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 IER5Q5VY09 327 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 PLA2G4FQ68DD2 849 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 OTOP2Q7RTS6 562 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 TPH2Q8IWU9 490 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 C4orf19Q8IY42 314 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 METTL13Q8N6R0 699 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 ERMNQ8TAM6 284 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 RAB34Q9BZG1 259 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 WRAP73Q9P2S5 460 aaPredicted RBP14.32□□□□□ -0.12
CLIP2-209ENST00000493166 MTMR6Q9Y217 621 aa14.32□□□□□ -0.12
CLIP2-209ENST00000493166 SLITRK3O94933 977 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 STBD1O95210 358 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 CXCL10P02778 98 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 TMOD1P28289 359 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 YWHABP31946 246 aaKnown RBP14.31□□□□□ -0.12
CLIP2-209ENST00000493166 MRPS6P82932 125 aaKnown RBP14.31□□□□□ -0.12
CLIP2-209ENST00000493166 ATP2C1P98194 919 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-209ENST00000493166 MGAT3Q09327 533 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 TMEM62Q0P6H9 643 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 BECN1Q14457 450 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 GPNMBQ14956 572 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 TARBP2Q15633 366 aaKnown RBP14.31□□□□□ -0.12
CLIP2-209ENST00000493166 EFCAB12Q6NXP0 572 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 DTHD1Q6ZMT9 781 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 ANO5Q75V66 913 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 OTUD6AQ7L8S5 288 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 NME8Q8N427 588 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 VWCEQ96DN2 955 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 HSD17B14Q9BPX1 270 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 SH2D3AQ9BRG2 576 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 TRPV2Q9Y5S1 764 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 CDY2AQ9Y6F7 541 aa14.31□□□□□ -0.12
CLIP2-209ENST00000493166 ZBBXA8MT70 800 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 BMP15O95972 392 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 CHRNA1P02708 482 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 PDIA4P13667 645 aaKnown RBP14.3□□□□□ -0.12
CLIP2-209ENST00000493166 CLCN3P51790 818 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 LRIT3Q3SXY7 679 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 HAUS3Q68CZ6 603 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 CNKSR3Q6P9H4 555 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 KIAA0319LQ8IZA0 1049 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 LRRC71Q8N4P6 559 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 CEP170P1Q96L14 293 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 CCDC43Q96MW1 224 aaKnown RBP14.3□□□□□ -0.12
CLIP2-209ENST00000493166 MAP7D2Q96T17 732 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 ZSCAN16Q9H4T2 348 aaPredicted RBP14.3□□□□□ -0.12
CLIP2-209ENST00000493166 SUGCTQ9HAC7 445 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 TUFT1Q9NNX1 390 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 CYP26B1Q9NR63 512 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 LRWD1Q9UFC0 647 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 AKT3Q9Y243 479 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 MYH11P35749 1972 aa14.3□□□□□ -0.12
CLIP2-209ENST00000493166 MED24O75448 989 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 BAIAP3O94812 1187 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 LYPLA2O95372 231 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 GHRP10912 638 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 NPEPPSP55786 919 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 PDIA5Q14554 519 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 XKR9Q5GH70 373 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 IGSF22Q8N9C0 903 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 JPH2Q9BR39 696 aaPredicted RBP14.29□□□□□ -0.12
CLIP2-209ENST00000493166 POLR3CQ9BUI4 534 aaPredicted RBP14.29□□□□□ -0.12
CLIP2-209ENST00000493166 CXXC1Q9P0U4 656 aaPredicted RBP14.29□□□□□ -0.12
CLIP2-209ENST00000493166 GINS2Q9Y248 185 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 PPME1Q9Y570 386 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 STK24Q9Y6E0 443 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 TCHHQ07283 1943 aa14.29□□□□□ -0.12
CLIP2-209ENST00000493166 VWA3AA6NCI4 1184 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 ZBTB39O15060 712 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 VTNP04004 478 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 SPATA31C1P0DKV0 1188 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 RPA1P27694 616 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 CCT6AP40227 531 aaKnown RBP14.28□□□□□ -0.12
CLIP2-209ENST00000493166 RFC5P40937 340 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 DNM2P50570 870 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 POLGP54098 1239 aaPredicted RBP14.28□□□□□ -0.12
CLIP2-209ENST00000493166 SF3A1Q15459 793 aaKnown RBP14.28□□□□□ -0.12
CLIP2-209ENST00000493166 IL17AQ16552 155 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 PLEKHG4Q58EX7 1191 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 SZT2Q5T011 3432 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 RASIP1Q5U651 963 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 ARL6IP4Q66PJ3 421 aaKnown RBP14.28□□□□□ -0.12
CLIP2-209ENST00000493166 FAM173BQ6P4H8 233 aa14.28□□□□□ -0.12
CLIP2-209ENST00000493166 POTEGQ6S5H5 508 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms