RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 SAFBQ15424 915 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 ZNF174Q15697 407 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 FBXO47Q5MNV8 452 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 ANO5Q75V66 913 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 CKAP2LQ8IYA6 745 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 NME8Q8N427 588 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 ZNF579Q8NAF0 562 aaKnown RBP8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 PHOSPHO2Q8TCD6 241 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 FAM161BQ96MY7 647 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 GUCD1Q96NT3 240 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 SH2D3AQ9BRG2 576 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 AGO3Q9H9G7 860 aaKnown RBP8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 NRBP2Q9NSY0 501 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 RGL1Q9NZL6 768 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 CDY2AQ9Y6F7 541 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 SCN5AQ14524 2016 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 IGKV6-21A0A0C4DH24 114 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 DDX11L8A8MPP1 907 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 NEMFO60524 1076 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 GPR32O75388 356 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 SLITRK3O94933 977 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 BAG4O95429 457 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 GHRP10912 638 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 MCM7P33993 719 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 TXKP42681 527 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 QARSP47897 775 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 CLCN3P51790 818 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 PSMC5P62195 406 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 DRP2Q13474 957 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 IKBKEQ14164 716 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 CALCRLQ16602 461 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 XKR3Q5GH77 459 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 IER5Q5VY09 327 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 NCAPH2Q6IBW4 605 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 RSPH3Q86UC2 560 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 RTN4RL1Q86UN2 441 aaPredicted RBP8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 HERC6Q8IVU3 1022 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 SLFN12Q8IYM2 578 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 LRRC71Q8N4P6 559 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 TMEM40Q8WWA1 233 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 LINC01599Q8WXQ3 324 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 TIFAQ96CG3 184 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 DYDC2Q96IM9 177 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 FAM167AQ96KS9 214 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 HSD17B14Q9BPX1 270 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 CELF4Q9BZC1 486 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 MTIF3Q9H2K0 278 aaKnown RBP8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 NKX2-4Q9H2Z4 354 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 TTC12Q9H892 705 aaPredicted RBP8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 TCEAL9Q9UHQ7 104 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 PCDHA12Q9UN75 941 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 SMC3Q9UQE7 1217 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 TRPV2Q9Y5S1 764 aa8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 TRIP12Q14669 1992 aaPredicted RBP8.08□□□□□ -1.12
PDLIM1-204ENST00000492511 KDM3AQ9Y4C1 1321 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 PRUNE2Q8WUY3 3088 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 TANC1Q9C0D5 1861 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 REV3LO60673 3130 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 A0A087WWV3 80 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 LCHNA4D1U4 455 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 ENPP3O14638 875 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 MAGEB2O15479 319 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 MARCH6O60337 910 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 MAFO75444 373 aaPredicted RBP8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 VTNP04004 478 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 SPATA31C1P0DKV0 1188 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 CD52P31358 61 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 TRAPPC10P48553 1259 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 NPEPPSP55786 919 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 CTTNQ14247 550 aaKnown RBP8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 GRIN2CQ14957 1233 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 IL17AQ16552 155 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 MTERF2Q49AM1 385 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 TTC38Q5R3I4 469 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 PLA2G4FQ68DD2 849 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 EFCAB12Q6NXP0 572 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 TSHZ1Q6ZSZ6 1077 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 C4orf19Q8IY42 314 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 CRIPAKQ8N1N5 446 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 METTL13Q8N6R0 699 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 TET1Q8NFU7 2136 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 SEPT8Q92599 483 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 PPP1R16BQ96T49 567 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 SLC9A7Q96T83 725 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 CDX2Q99626 313 aaPredicted RBP8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 EIF2AK1Q9BQI3 630 aaKnown RBP8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 LXNQ9BS40 222 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 IFIH1Q9BYX4 1025 aaKnown RBP8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 ADAMTS10Q9H324 1103 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 TMX1Q9H3N1 280 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 ZNF576Q9H609 170 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 SEPT9Q9UHD8 586 aaPredicted RBP8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 PADI3Q9ULW8 664 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 CEP131Q9UPN4 1083 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 NOC2LQ9Y3T9 749 aaKnown RBP8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 PCDHB6Q9Y5E3 794 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 PCDHA11Q9Y5I1 949 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms