RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PHF20Q9BVI0 1012 aa14.36□□□□□ -0.11
SEC61A1-206ENST00000491668 CELF4Q9BZC1 486 aaKnown RBP14.36□□□□□ -0.11
SEC61A1-206ENST00000491668 TMX1Q9H3N1 280 aa14.36□□□□□ -0.11
SEC61A1-206ENST00000491668 THEGQ9P2T0 379 aa14.36□□□□□ -0.11
SEC61A1-206ENST00000491668 PCDHA10Q9Y5I2 948 aa14.36□□□□□ -0.11
SEC61A1-206ENST00000491668 TRPV2Q9Y5S1 764 aa14.36□□□□□ -0.11
SEC61A1-206ENST00000491668 IGSF9BQ9UPX0 1349 aa14.36□□□□□ -0.11
SEC61A1-206ENST00000491668 KDM3AQ9Y4C1 1321 aa14.36□□□□□ -0.11
SEC61A1-206ENST00000491668 EVPLQ92817 2033 aa14.36□□□□□ -0.11
SEC61A1-206ENST00000491668 COL1A2P08123 1366 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 MYH9P35579 1960 aaKnown RBP14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 PSMD10O75832 226 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 FDPSP14324 419 aaKnown RBP14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 TFF2Q03403 129 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 ME3Q16798 604 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 Q4G0T1 1027 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 ZNF484Q5JVG2 852 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 IER5Q5VY09 327 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 HSCBQ8IWL3 235 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 NECAB1Q8N987 351 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 OXER1Q8TDS5 423 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 TMEM40Q8WWA1 233 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 ATXN2LQ8WWM7 1075 aaKnown RBP14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 ASB2Q96Q27 587 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 RIT2Q99578 217 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 UNC45AQ9H3U1 944 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 SH2B1Q9NRF2 756 aaPredicted RBP14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 GABBR1Q9UBS5 961 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 PADI3Q9ULW8 664 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 STK36Q9NRP7 1315 aa14.35□□□□□ -0.11
SEC61A1-206ENST00000491668 GTPBP6O43824 516 aaPredicted RBP14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 CDKL5O76039 1030 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 STBD1O95210 358 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 RPLP2P05387 115 aaKnown RBP14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 PSAPP07602 524 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 TMEM266Q2M3C6 531 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 EPC2Q52LR7 807 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 TJAP1Q5JTD0 557 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 GALNT17Q6IS24 598 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 TRMT1LQ7Z2T5 733 aaKnown RBP14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 FAM177A1Q8N128 213 aaPredicted RBP14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 NME8Q8N427 588 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 LINC01465Q8N7H1 131 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 ETNPPLQ8TBG4 499 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 BBXQ8WY36 941 aaPredicted RBP14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 TNPO1Q92973 898 aaKnown RBP14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 YME1L1Q96TA2 773 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 DISC1Q9NRI5 854 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 SQORQ9Y6N5 450 aa14.34□□□□□ -0.11
SEC61A1-206ENST00000491668 WDR64B1ANS9 1081 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 CHMP2AO43633 222 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 SLC37A4O43826 429 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 GAS7O60861 476 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 ST3GAL1Q11201 340 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 INF2Q27J81 1249 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 EARS2Q5JPH6 523 aaKnown RBP14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 LRCH2Q5VUJ6 765 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 CCDC83Q8IWF9 413 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 LMCD1Q9NZU5 365 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 NOC2LQ9Y3T9 749 aaKnown RBP14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 MYO7AQ13402 2215 aa14.33□□□□□ -0.12
SEC61A1-206ENST00000491668 NLRC5Q86WI3 1866 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 TMEM150BA6NC51 233 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 FAM205CA6NFA0 338 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 MGEA5O60502 916 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 GPR32O75388 356 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 DGKIO75912 1065 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 CD2BP2O95400 341 aaKnown RBP14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 BMP1P13497 986 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 MRPS5P82675 430 aaKnown RBP14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 NONOQ15233 471 aaKnown RBP eCLIP14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 MOXD1Q6UVY6 613 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 CKAP2LQ8IYA6 745 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 FBXO22Q8NEZ5 403 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 TNFRSF25Q93038 417 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 GTF3C6Q969F1 213 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 CEP89Q96ST8 783 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 PPP1R16BQ96T49 567 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 ERVK-5Q9HDB9 667 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 ORC3Q9UBD5 711 aaPredicted RBP14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 SAMM50Q9Y512 469 aa14.32□□□□□ -0.12
SEC61A1-206ENST00000491668 M0QZ92 97 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 EML1O00423 815 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 VTNP04004 478 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 OATP04181 439 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 HSP90AA1P07900 732 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 KCNQ1P51787 676 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 CLCN3P51790 818 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 PRKCEQ02156 737 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 PAK2Q13177 524 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 TARBP2Q15633 366 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 KIZQ2M2Z5 673 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 KRT25Q7Z3Z0 450 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 TMEM192Q8IY95 271 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 NSUN7Q8NE18 718 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 SNX21Q969T3 373 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 TMX3Q96JJ7 454 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 TEKT3Q9BXF9 490 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms