RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 FIBCD1Q8N539 461 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-211ENST00000491581 ZNF689Q96CS4 500 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-211ENST00000491581 IL17RAQ96F46 866 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 OSMRQ99650 979 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 CELF4Q9BZC1 486 aaKnown RBP10.12□□□□□ -0.79
HDAC3-211ENST00000491581 ZSWIM6Q9HCJ5 1215 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 GABBR1Q9UBS5 961 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 PCDHA2Q9Y5H9 948 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 C5orf42Q9H799 3197 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 CUL9Q8IWT3 2517 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 IGSF9BQ9UPX0 1349 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-211ENST00000491581 MAFGO15525 162 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 C22orf31O95567 290 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 FOSP01100 380 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-211ENST00000491581 CYP3A4P08684 503 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 HMGB1P09429 215 aaKnown RBP10.11□□□□□ -0.79
HDAC3-211ENST00000491581 FGFR1P11362 822 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 COL9A1P20849 921 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 LTBRP36941 435 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 PBX3P40426 434 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 KRT76Q01546 638 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 HYAL1Q12794 435 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 BTG3Q14201 252 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-211ENST00000491581 EARS2Q5JPH6 523 aaKnown RBP10.11□□□□□ -0.79
HDAC3-211ENST00000491581 PLPPR4Q7Z2D5 763 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 FAM228AQ86W67 206 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 CKAP2LQ8IYA6 745 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 METTL13Q8N6R0 699 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 BANK1Q8NDB2 785 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 IL27Q8NEV9 243 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 TBCKQ8TEA7 893 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 ATP8B4Q8TF62 1192 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 MRPL38Q96DV4 380 aaKnown RBP10.11□□□□□ -0.79
HDAC3-211ENST00000491581 TSPYL2Q9H2G4 693 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-211ENST00000491581 UNC45AQ9H3U1 944 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 IGFLR1Q9H665 355 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 C6orf50Q9HD87 102 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 ERVK-5Q9HDB9 667 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 C11orf16Q9NQ32 467 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 ARID2Q68CP9 1835 aa10.11□□□□□ -0.79
HDAC3-211ENST00000491581 SMIM35A0A1B0GVV1 85 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 ESYT2A0FGR8 921 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 RRN3P2A6NIE6 340 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 SLC37A4O43826 429 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 SEC24BO95487 1268 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 IFNAR1P17181 557 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 BMPR1AP36894 532 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 NLRP5P59047 1200 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 SCRN1Q12765 414 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 PAK2Q13177 524 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 LONRF3Q496Y0 759 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 NECAB1Q8N987 351 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 ZNF579Q8NAF0 562 aaKnown RBP10.1□□□□□ -0.79
HDAC3-211ENST00000491581 FEZF2Q8TBJ5 459 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 APBB2Q92870 758 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 RNF26Q9BY78 433 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-211ENST00000491581 BMP2KQ9NSY1 1161 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-211ENST00000491581 CLDND1Q9NY35 253 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 TPCN1Q9ULQ1 816 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 ST3GAL5Q9UNP4 418 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 SAMM50Q9Y512 469 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 MYO7AQ13402 2215 aa10.1□□□□□ -0.79
HDAC3-211ENST00000491581 hCG_1984214I3L0E3 225 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 M0R2N6 131 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 WNT7AO00755 349 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 HBP1O60381 514 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 TBX10O75333 385 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 GPR32O75388 356 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 STBD1O95210 358 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 CTDNEP1O95476 244 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 ITGB1P05556 798 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 EVCP57679 992 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 IER5Q5VY09 327 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 FAM160B1Q5W0V3 765 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 PLA2G4FQ68DD2 849 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 PTCRAQ6ISU1 281 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-211ENST00000491581 MIS18BP1Q6P0N0 1132 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 NIPA1Q7RTP0 329 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 RBM23Q86U06 439 aaKnown RBP10.09□□□□□ -0.79
HDAC3-211ENST00000491581 RSPH3Q86UC2 560 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 KSR1Q8IVT5 923 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 ZNF713Q8N859 430 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-211ENST00000491581 KLHL23Q8NBE8 558 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 ADAM2Q99965 735 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 RNF19AQ9NV58 838 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 WRAP73Q9P2S5 460 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-211ENST00000491581 CDH22Q9UJ99 828 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 COG5Q9UP83 839 aa10.09□□□□□ -0.79
HDAC3-211ENST00000491581 MAFBQ9Y5Q3 323 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-211ENST00000491581 A0A087WWV3 80 aa10.08□□□□□ -0.8
HDAC3-211ENST00000491581 CCDC196A0A1B0GTZ2 297 aa10.08□□□□□ -0.8
HDAC3-211ENST00000491581 EML1O00423 815 aa10.08□□□□□ -0.8
HDAC3-211ENST00000491581 RPS6KA5O75582 802 aa10.08□□□□□ -0.8
HDAC3-211ENST00000491581 REC8O95072 547 aa10.08□□□□□ -0.8
HDAC3-211ENST00000491581 CIITAP33076 1130 aa10.08□□□□□ -0.8
HDAC3-211ENST00000491581 RCAN1P53805 252 aa10.08□□□□□ -0.8
HDAC3-211ENST00000491581 NLRP11P59045 1033 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms