RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 TAB2Q9NYJ8 693 aa11.23□□□□□ -0.61
SREBF2-208ENST00000491541 TNKSO95271 1327 aa11.23□□□□□ -0.61
SREBF2-208ENST00000491541 TSC2P49815 1807 aa11.23□□□□□ -0.61
SREBF2-208ENST00000491541 WASHC2DQ5SRD0 308 aa11.23□□□□□ -0.61
SREBF2-208ENST00000491541 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
SREBF2-208ENST00000491541 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
SREBF2-208ENST00000491541 IFIH1Q9BYX4 1025 aaKnown RBP11.23□□□□□ -0.61
SREBF2-208ENST00000491541 LRRC27Q9C0I9 530 aa11.23□□□□□ -0.61
SREBF2-208ENST00000491541 DPH5Q9H2P9 285 aa11.23□□□□□ -0.61
SREBF2-208ENST00000491541 PPCSQ9HAB8 311 aa11.23□□□□□ -0.61
SREBF2-208ENST00000491541 ADAMTS3O15072 1205 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 ZBED4O75132 1171 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 ATP5HO75947 161 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 CABP4P57796 275 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 GRB10Q13322 594 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 GRM2Q14416 872 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 CWF19L1Q69YN2 538 aaKnown RBP11.22□□□□□ -0.61
SREBF2-208ENST00000491541 MFSD6Q6ZSS7 791 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 NOP9Q86U38 636 aaKnown RBP11.22□□□□□ -0.61
SREBF2-208ENST00000491541 SH2D3CQ8N5H7 860 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 DENND1AQ8TEH3 1009 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 RIOX1Q9H6W3 641 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 PPANQ9NQ55 473 aaKnown RBP11.22□□□□□ -0.61
SREBF2-208ENST00000491541 PLAAQ9Y263 795 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 ADAMTSL1Q8N6G6 1762 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 FAM205CA6NFA0 338 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 VCAM1P19320 739 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 CASP1P29466 404 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 SLC7A5Q01650 507 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 OCRLQ01968 901 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 RASGRF1Q13972 1273 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 CTC1Q2NKJ3 1217 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 C8orf74Q6P047 294 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 ZNF276Q8N554 614 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 IFT81Q8WYA0 676 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 UTP4Q969X6 686 aaKnown RBP11.22□□□□□ -0.61
SREBF2-208ENST00000491541 MYL10Q9BUA6 226 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 MMADHCQ9H3L0 296 aaPredicted RBP11.22□□□□□ -0.61
SREBF2-208ENST00000491541 RXFP1Q9HBX9 757 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
SREBF2-208ENST00000491541 GDAQ9Y2T3 454 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 PAX7P23759 505 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 FBXO33Q7Z6M2 555 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■■■■■ 40.9
SREBF2-208ENST00000491541 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.22□□□□□ -0.611e-6■□□□□ 8.3
SREBF2-208ENST00000491541 ESR2Q92731 530 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 TBC1D31Q96DN5 1066 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 TIPINQ9BVW5 301 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 TRIM6Q9C030 488 aaPredicted RBP11.22□□□□□ -0.61
SREBF2-208ENST00000491541 ETAA1Q9NY74 926 aa11.22□□□□□ -0.61
SREBF2-208ENST00000491541 ATP5BP06576 529 aaKnown RBP11.21□□□□□ -0.61
SREBF2-208ENST00000491541 NQO1P15559 274 aaKnown RBP11.21□□□□□ -0.61
SREBF2-208ENST00000491541 TNNC1P63316 161 aa11.21□□□□□ -0.61
SREBF2-208ENST00000491541 NFRKBQ6P4R8 1299 aa11.21□□□□□ -0.61
SREBF2-208ENST00000491541 SYDE1Q6ZW31 735 aaPredicted RBP11.21□□□□□ -0.61
SREBF2-208ENST00000491541 TPCN2Q8NHX9 752 aa11.21□□□□□ -0.61
SREBF2-208ENST00000491541 CABP5Q9NP86 173 aa11.21□□□□□ -0.61
SREBF2-208ENST00000491541 GOLGA6L10A6NI86 522 aa11.21□□□□□ -0.61
SREBF2-208ENST00000491541 PRPF4O43172 522 aaKnown RBP eCLIP11.21□□□□□ -0.615e-9■■□□□ 11.4
SREBF2-208ENST00000491541 SKAP2O75563 359 aaPredicted RBP11.21□□□□□ -0.61
SREBF2-208ENST00000491541 RWDD2BP57060 319 aa11.21□□□□□ -0.61
SREBF2-208ENST00000491541 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.61
SREBF2-208ENST00000491541 DCAF12L1Q5VU92 463 aa11.21□□□□□ -0.61
SREBF2-208ENST00000491541 NAIF1Q69YI7 327 aaPredicted RBP11.21□□□□□ -0.61
SREBF2-208ENST00000491541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
SREBF2-208ENST00000491541 SETDB2Q96T68 719 aa11.21□□□□□ -0.61
SREBF2-208ENST00000491541 POLIQ9UNA4 740 aa11.21□□□□□ -0.61
SREBF2-208ENST00000491541 PPP1R12BO60237 982 aaPredicted RBP11.21□□□□□ -0.62
SREBF2-208ENST00000491541 RTN3O95197 1032 aaPredicted RBP11.21□□□□□ -0.62
SREBF2-208ENST00000491541 KRT14P02533 472 aa11.21□□□□□ -0.62
SREBF2-208ENST00000491541 FERP16591 822 aa11.21□□□□□ -0.62
SREBF2-208ENST00000491541 IL6STP40189 918 aaPredicted RBP11.21□□□□□ -0.62
SREBF2-208ENST00000491541 ROR2Q01974 943 aaKnown RBP11.21□□□□□ -0.62
SREBF2-208ENST00000491541 RAPGEF1Q13905 1077 aa11.21□□□□□ -0.62
SREBF2-208ENST00000491541 KIF22Q14807 665 aa11.21□□□□□ -0.62
SREBF2-208ENST00000491541 CNGA2Q16280 664 aa11.21□□□□□ -0.62
SREBF2-208ENST00000491541 RIBC1Q8N443 379 aaPredicted RBP11.21□□□□□ -0.62
SREBF2-208ENST00000491541 ATRNL1Q5VV63 1379 aa11.21□□□□□ -0.62
SREBF2-208ENST00000491541 ANK1P16157 1881 aa11.21□□□□□ -0.62
SREBF2-208ENST00000491541 ATP5J2-PTCD1G3V325 749 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 KIAA0391O15091 583 aaKnown RBP11.2□□□□□ -0.62
SREBF2-208ENST00000491541 NKRFO15226 690 aaKnown RBP eCLIP11.2□□□□□ -0.624e-6■□□□□ 9.1
SREBF2-208ENST00000491541 CNGA1P29973 690 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 GSTA3Q16772 222 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 BLIDQ8IZY5 108 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 CCDC43Q96MW1 224 aaKnown RBP11.2□□□□□ -0.62
SREBF2-208ENST00000491541 RPS6KC1Q96S38 1066 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 DHRS4Q9BTZ2 278 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 RAB17Q9H0T7 212 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 STK24Q9Y6E0 443 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 GUCY1A3Q02108 690 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 PDCD2Q16342 344 aaPredicted RBP11.2□□□□□ -0.62
SREBF2-208ENST00000491541 RRAGBQ5VZM2 374 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 ADGRA1Q86SQ6 560 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 ARMC2Q8NEN0 867 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 CKAP2Q8WWK9 683 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 SERPINB12Q96P63 405 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 ZNF341Q9BYN7 854 aa11.2□□□□□ -0.62
SREBF2-208ENST00000491541 FOXP3Q9BZS1 431 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms