RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 XKR3Q5GH77 459 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 NOSTRINQ8IVI9 506 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 HERC6Q8IVU3 1022 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 METTL13Q8N6R0 699 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 USP38Q8NB14 1042 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 BANK1Q8NDB2 785 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 ZNF576Q9H609 170 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 SEPT9Q9UHD8 586 aaPredicted RBP18.01■□□□□ 0.47
PFDN6-207ENST00000491382 NOL7Q9UMY1 257 aaKnown RBP18.01■□□□□ 0.47
PFDN6-207ENST00000491382 PCDHA12Q9UN75 941 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 SQORQ9Y6N5 450 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 LOXHD1Q8IVV2 1947 aa18.01■□□□□ 0.47
PFDN6-207ENST00000491382 AMHP03971 560 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 ATP2B1P20020 1258 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 TMOD1P28289 359 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 QARSP47897 775 aaKnown RBP18■□□□□ 0.47
PFDN6-207ENST00000491382 RABGGTBP53611 331 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 TMEM62Q0P6H9 643 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 FBXO47Q5MNV8 452 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 NCAPH2Q6IBW4 605 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 TSHZ1Q6ZSZ6 1077 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 MAP7D2Q96T17 732 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 ZBED2Q9BTP6 218 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 CELF4Q9BZC1 486 aaKnown RBP18■□□□□ 0.47
PFDN6-207ENST00000491382 TTYH1Q9H313 450 aaPredicted RBP18■□□□□ 0.47
PFDN6-207ENST00000491382 SMC3Q9UQE7 1217 aa18■□□□□ 0.47
PFDN6-207ENST00000491382 KDM3AQ9Y4C1 1321 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 EML1O00423 815 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 P4HBP07237 508 aaKnown RBP17.99■□□□□ 0.47
PFDN6-207ENST00000491382 GJB2P29033 226 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 MCM7P33993 719 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 TRAPPC10P48553 1259 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 DEFB103AP81534 67 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 TBC1D8BQ0IIM8 1120 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 LPIN1Q14693 890 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 EPHA7Q15375 998 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 TCTN1Q2MV58 587 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 PPP2R2DQ66LE6 453 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 KIAA0319LQ8IZA0 1049 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 NIFKQ9BYG3 293 aaKnown RBP17.99■□□□□ 0.47
PFDN6-207ENST00000491382 NKX2-4Q9H2Z4 354 aa17.99■□□□□ 0.47
PFDN6-207ENST00000491382 TTC12Q9H892 705 aaPredicted RBP17.99■□□□□ 0.47
PFDN6-207ENST00000491382 YBX2Q9Y2T7 364 aaKnown RBP17.99■□□□□ 0.47
PFDN6-207ENST00000491382 H3BQV1 296 aa17.98■□□□□ 0.47
PFDN6-207ENST00000491382 TLL1O43897 1013 aa17.98■□□□□ 0.47
PFDN6-207ENST00000491382 U2AF2P26368 475 aaKnown RBP eCLIP17.98■□□□□ 0.472e-8■■□□□ 12.2
PFDN6-207ENST00000491382 TXKP42681 527 aa17.98■□□□□ 0.47
PFDN6-207ENST00000491382 SPIRE1Q08AE8 756 aa17.98■□□□□ 0.47
PFDN6-207ENST00000491382 MTERF2Q49AM1 385 aa17.98■□□□□ 0.47
PFDN6-207ENST00000491382 EFCAB12Q6NXP0 572 aa17.98■□□□□ 0.47
PFDN6-207ENST00000491382 ZNF710Q8N1W2 664 aa17.98■□□□□ 0.47
PFDN6-207ENST00000491382 GUCD1Q96NT3 240 aa17.98■□□□□ 0.47
PFDN6-207ENST00000491382 OSBPL7Q9BZF2 842 aa17.98■□□□□ 0.47
PFDN6-207ENST00000491382 DDX11L8A8MPP1 907 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 WNT7AO00755 349 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 GJB5O95377 273 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 PAK2Q13177 524 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 MKRN4PQ13434 485 aaPredicted RBP17.97■□□□□ 0.47
PFDN6-207ENST00000491382 TTC38Q5R3I4 469 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 ODR4Q5SWX8 454 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 FAM43BQ6ZT52 329 aaPredicted RBP17.97■□□□□ 0.47
PFDN6-207ENST00000491382 MYOCDQ8IZQ8 938 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 NEK9Q8TD19 979 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 MTMR9Q96QG7 549 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 CDX2Q99626 313 aaPredicted RBP17.97■□□□□ 0.47
PFDN6-207ENST00000491382 JPH2Q9BR39 696 aaPredicted RBP17.97■□□□□ 0.47
PFDN6-207ENST00000491382 LXNQ9BS40 222 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 AKT3Q9Y243 479 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 GINS2Q9Y248 185 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 STXBP5LQ9Y2K9 1186 aa17.97■□□□□ 0.47
PFDN6-207ENST00000491382 CA3P07451 260 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 MYOGP15173 224 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 CLCN3P51790 818 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 TARBP2Q15633 366 aaKnown RBP17.96■□□□□ 0.47
PFDN6-207ENST00000491382 MCTP1Q6DN14 999 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
PFDN6-207ENST00000491382 OTUD6AQ7L8S5 288 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 C4orf19Q8IY42 314 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 EXOC8Q8IYI6 725 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 FTHL17Q9BXU8 183 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 ZSWIM4Q9H7M6 989 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 SUGCTQ9HAC7 445 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 PPME1Q9Y570 386 aa17.96■□□□□ 0.47
PFDN6-207ENST00000491382 ARID2Q68CP9 1835 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 STBD1O95210 358 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 VTNP04004 478 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 OR52Z1P0C646 297 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 CD52P31358 61 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 DNM2P50570 870 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 CRYBB1P53674 252 aaPredicted RBP17.95■□□□□ 0.46
PFDN6-207ENST00000491382 GRIN2CQ14957 1233 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 ZNF174Q15697 407 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 ANO5Q75V66 913 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 LRRC71Q8N4P6 559 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 LINC01465Q8N7H1 131 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 DYDC2Q96IM9 177 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 RAD9AQ99638 391 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 EIF2AK1Q9BQI3 630 aaKnown RBP17.95■□□□□ 0.46
PFDN6-207ENST00000491382 TMEM60Q9H2L4 133 aa17.95■□□□□ 0.46
PFDN6-207ENST00000491382 AGO3Q9H9G7 860 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms