RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ZNF862O60290 1169 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 C22orf31O95567 290 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 Q4G0T1 1027 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 CRIPAKQ8N1N5 446 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 MBOAT7Q96N66 472 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 SAMD11Q96NU1 681 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 PHF20Q9BVI0 1012 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 UNC45AQ9H3U1 944 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 DISC1Q9NRI5 854 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 GJB4Q9NTQ9 266 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 TCEAL9Q9UHQ7 104 aa20.36■□□□□ 0.85
HMGN1-219ENST00000491183 NLRC5Q86WI3 1866 aa20.35■□□□□ 0.85
HMGN1-219ENST00000491183 WDR64B1ANS9 1081 aa20.35■□□□□ 0.85
HMGN1-219ENST00000491183 PSMD10O75832 226 aa20.35■□□□□ 0.85
HMGN1-219ENST00000491183 SEC24BO95487 1268 aa20.35■□□□□ 0.85
HMGN1-219ENST00000491183 TMEM266Q2M3C6 531 aa20.35■□□□□ 0.85
HMGN1-219ENST00000491183 LRCH2Q5VUJ6 765 aa20.35■□□□□ 0.85
HMGN1-219ENST00000491183 TMEM192Q8IY95 271 aa20.35■□□□□ 0.85
HMGN1-219ENST00000491183 ZNF689Q96CS4 500 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-219ENST00000491183 TMX1Q9H3N1 280 aa20.35■□□□□ 0.85
HMGN1-219ENST00000491183 RC3H2Q9HBD1 1191 aaKnown RBP20.35■□□□□ 0.85
HMGN1-219ENST00000491183 STK36Q9NRP7 1315 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 GAS7O60861 476 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 CDKL5O76039 1030 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 LINC00271P0C7V0 271 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 UGCGQ16739 394 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 B3GNT9Q6UX72 402 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 TMEM40Q8WWA1 233 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 TEKT3Q9BXF9 490 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 FTHL17Q9BXU8 183 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 GINS2Q9Y248 185 aa20.34■□□□□ 0.85
HMGN1-219ENST00000491183 NOC2LQ9Y3T9 749 aaKnown RBP20.34■□□□□ 0.85
HMGN1-219ENST00000491183 TCF20Q9UGU0 1960 aaKnown RBP20.34■□□□□ 0.85
HMGN1-219ENST00000491183 SPTBN5Q9NRC6 3674 aaKnown RBP20.33■□□□□ 0.85
HMGN1-219ENST00000491183 H3BNC9 293 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 CHMP2AO43633 222 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 DGKIO75912 1065 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 BMP1P13497 986 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 PAK2Q13177 524 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 NONOQ15233 471 aaKnown RBP eCLIP20.33■□□□□ 0.85
HMGN1-219ENST00000491183 ANKRD1Q15327 319 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 ME3Q16798 604 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 INF2Q27J81 1249 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 MOXD1Q6UVY6 613 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 KRT25Q7Z3Z0 450 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 FIBCD1Q8N539 461 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 NECAB1Q8N987 351 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 ETNPPLQ8TBG4 499 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 ERVK-5Q9HDB9 667 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 COG5Q9UP83 839 aa20.33■□□□□ 0.85
HMGN1-219ENST00000491183 RALGAPA2Q2PPJ7 1873 aa20.33■□□□□ 0.84
HMGN1-219ENST00000491183 GPR32O75388 356 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 LARGE1O95461 756 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 OATP04181 439 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 FDPSP14324 419 aaKnown RBP20.32■□□□□ 0.84
HMGN1-219ENST00000491183 SFNP31947 248 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 KCNQ1P51787 676 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 JAK3P52333 1124 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 NFX1Q12986 1120 aaKnown RBP20.32■□□□□ 0.84
HMGN1-219ENST00000491183 GPM6BQ13491 265 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 METTL13Q8N6R0 699 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 LINC01465Q8N7H1 131 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 OXER1Q8TDS5 423 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 FAM167AQ96KS9 214 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 PPP1R16BQ96T49 567 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 CEP131Q9UPN4 1083 aa20.32■□□□□ 0.84
HMGN1-219ENST00000491183 ADGRA3Q8IWK6 1321 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 MAGEB2O15479 319 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 MGEA5O60502 916 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 RPS6KA5O75582 802 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 VTNP04004 478 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 CRYBB1P53674 252 aaPredicted RBP20.31■□□□□ 0.84
HMGN1-219ENST00000491183 PRKCEQ02156 737 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 KIZQ2M2Z5 673 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 EFCAB12Q6NXP0 572 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 ADAMTS19Q8TE59 1207 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 HLA-CQ95604 372 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 MRPL38Q96DV4 380 aaKnown RBP20.31■□□□□ 0.84
HMGN1-219ENST00000491183 NRBP2Q9NSY0 501 aa20.31■□□□□ 0.84
HMGN1-219ENST00000491183 ORC3Q9UBD5 711 aaPredicted RBP20.31■□□□□ 0.84
HMGN1-219ENST00000491183 DDX25Q9UHL0 483 aaKnown RBP20.31■□□□□ 0.84
HMGN1-219ENST00000491183 SLC37A4O43826 429 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 STBD1O95210 358 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 BMPR1AP36894 532 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 CLCN3P51790 818 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 AAK1Q2M2I8 961 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 LETM2Q2VYF4 491 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 MIER3Q7Z3K6 550 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 NPAS4Q8IUM7 802 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 RDM1Q8NG50 284 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 CLP1Q92989 425 aaKnown RBP20.3■□□□□ 0.84
HMGN1-219ENST00000491183 OSMRQ99650 979 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 ST3GAL5Q9UNP4 418 aa20.3■□□□□ 0.84
HMGN1-219ENST00000491183 XIRP2A4UGR9 3374 aa20.29■□□□□ 0.84
HMGN1-219ENST00000491183 CCDC194A0A1B0GVG4 234 aa20.29■□□□□ 0.84
HMGN1-219ENST00000491183 C5orf67F2Z3F1 127 aa20.29■□□□□ 0.84
HMGN1-219ENST00000491183 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
HMGN1-219ENST00000491183 XBP1P17861 261 aa20.29■□□□□ 0.84
HMGN1-219ENST00000491183 NEK4P51957 841 aa20.29■□□□□ 0.84
HMGN1-219ENST00000491183 BTG3Q14201 252 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms