RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 FBXO38Q6PIJ6 1188 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 FOXR2Q6PJQ5 311 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 DHX37Q8IY37 1157 aaKnown RBP7.99□□□□□ -1.13
NPHP3-208ENST00000490993 PAGR1Q9BTK6 254 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 ATP6V0A4Q9HBG4 840 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 TBC1D12O60347 775 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 SCP2P22307 547 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 OAS2P29728 719 aaKnown RBP7.99□□□□□ -1.13
NPHP3-208ENST00000490993 GBP1P32455 592 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 PPFIA1Q13136 1202 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 COG2Q14746 738 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 MTF1Q14872 753 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 ARMC9Q7Z3E5 817 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 ZNF280CQ8ND82 737 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 AFAP1L1Q8TED9 768 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 CCDC77Q9BR77 488 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 BCCIPQ9P287 314 aaKnown RBP eCLIP7.99□□□□□ -1.13
NPHP3-208ENST00000490993 LTBP4Q8N2S1 1624 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 SFI1A8K8P3 1242 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 LDHAP00338 332 aaKnown RBP7.99□□□□□ -1.13
NPHP3-208ENST00000490993 SNX16P57768 344 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 LONRF2Q1L5Z9 754 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 PPM1KQ8N3J5 372 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 HPS3Q969F9 1004 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 FAM167AQ96KS9 214 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 PNMA5Q96PV4 448 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 FEZ2Q9UHY8 353 aaPredicted RBP7.99□□□□□ -1.13
NPHP3-208ENST00000490993 LRP5O75197 1615 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 H0YHG0 523 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 TADA3O75528 432 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 STAM2O75886 525 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 BMP6P22004 513 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 MTMR2Q13614 643 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 SURF1Q15526 300 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 IL17AQ16552 155 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 BRDTQ58F21 947 aaPredicted RBP7.99□□□□□ -1.13
NPHP3-208ENST00000490993 ALKBH5Q6P6C2 394 aaKnown RBP7.99□□□□□ -1.13
NPHP3-208ENST00000490993 CCDC50Q8IVM0 306 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 WDR24Q96S15 920 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 PSMB7Q99436 277 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 KCNQ5Q9NR82 932 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 RGL1Q9NZL6 768 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 PCDHA10Q9Y5I2 948 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 TIAM2Q8IVF5 1701 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 IGKV6D-41A0A0C4DH26 115 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 NPHP3-ACAD11A0A0J9YXS1 232 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 HIP1RO75146 1068 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 HARSP12081 509 aaKnown RBP7.99□□□□□ -1.13
NPHP3-208ENST00000490993 P4HA1P13674 534 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 EVX2Q03828 476 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 EHHADHQ08426 723 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 PPP1R7Q15435 360 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 BTNL9Q6UXG8 535 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 ANKRD13CQ8N6S4 541 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 LRRIQ4A6NIV6 560 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 PIK3CDO00329 1044 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 KRIT1O00522 736 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 KIAA0391O15091 583 aaKnown RBP7.98□□□□□ -1.13
NPHP3-208ENST00000490993 HSPA6P17066 643 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 CAPN2P17655 700 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 PEX3P56589 373 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 PTK2Q05397 1052 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
NPHP3-208ENST00000490993 GPIHBP1Q8IV16 184 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 RHOT2Q8IXI1 618 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 KLHL7Q8IXQ5 586 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 FAM71BQ8TC56 605 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 CCDC127Q96BQ5 260 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 TSPYL1Q9H0U9 437 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 DNAJC12Q9UKB3 198 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 GRID2IPA4D2P6 1211 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 ATP2A1O14983 1001 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 MED24O75448 989 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 ABCB4P21439 1286 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 RUFY4Q6ZNE9 571 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 NIPA1Q7RTP0 329 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 ACER1Q8TDN7 264 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 HVCN1Q96D96 273 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 SEMA6BQ9H3T3 888 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 PCIF1Q9H4Z3 704 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 UBE2TQ9NPD8 197 aaPredicted RBP7.98□□□□□ -1.13
NPHP3-208ENST00000490993 ADAMTS1Q9UHI8 967 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 PPP2R3BQ9Y5P8 575 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 TNNC2P02585 160 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 YWHABP31946 246 aaKnown RBP7.98□□□□□ -1.13
NPHP3-208ENST00000490993 CIITAP33076 1130 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 EPHB4P54760 987 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 ZFPM1Q8IX07 1006 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 SCYL3Q8IZE3 742 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 TCP11Q8WWU5 503 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 CHP1Q99653 195 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 FERMT1Q9BQL6 677 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 DDX41Q9UJV9 622 aaKnown RBP7.98□□□□□ -1.13
NPHP3-208ENST00000490993 XIRP1Q702N8 1843 aaKnown RBP7.98□□□□□ -1.13
NPHP3-208ENST00000490993 GOLGA8KD6RF30 607 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 PLA2G6O60733 806 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 KIF4AO95239 1232 aa7.98□□□□□ -1.13
NPHP3-208ENST00000490993 DLATP10515 647 aaKnown RBP7.98□□□□□ -1.13
NPHP3-208ENST00000490993 VEGFAP15692 232 aaPredicted RBP7.98□□□□□ -1.13
NPHP3-208ENST00000490993 ACTN2P35609 894 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms