RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 HSD17B14Q9BPX1 270 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 SRRTQ9BXP5 876 aaKnown RBP11.36□□□□□ -0.59
HDAC3-210ENST00000490808 HSD3B7Q9H2F3 369 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 AGO4Q9HCK5 861 aaKnown RBP11.36□□□□□ -0.59
HDAC3-210ENST00000490808 VTA1Q9NP79 307 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 SLC39A2Q9NP94 309 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 SAMSN1Q9NSI8 373 aaKnown RBP11.36□□□□□ -0.59
HDAC3-210ENST00000490808 SZT2Q5T011 3432 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 ARHGEF35A5YM69 484 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 WDR64B1ANS9 1081 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 CHMP2AO43633 222 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 SLITRK3O94933 977 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 PGK2P07205 417 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 GJB1P08034 283 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
HDAC3-210ENST00000490808 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-210ENST00000490808 ITGB5P18084 799 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 EDNRBP24530 442 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 ALDH5A1P51649 535 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-210ENST00000490808 STK4Q13043 487 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 NR1I3Q14994 352 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 CENPPQ6IPU0 288 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 ZNF746Q6NUN9 644 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-210ENST00000490808 POTEGQ6S5H5 508 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 SLC30A10Q6XR72 485 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-210ENST00000490808 OTUD6AQ7L8S5 288 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 VSIG10LQ86VR7 867 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 CREBRFQ8IUR6 639 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 SMAP1Q8IYB5 467 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-210ENST00000490808 ANKLE1Q8NAG6 615 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 NPLOC4Q8TAT6 608 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 DPF3Q92784 378 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 GJA10Q969M2 543 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 DNAJC19Q96DA6 116 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 DYDC2Q96IM9 177 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 PAK6Q9NQU5 681 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-210ENST00000490808 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 KCNG1Q9UIX4 513 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 ODF2LQ9ULJ1 636 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 NFASCO94856 1347 aa11.35□□□□□ -0.59
HDAC3-210ENST00000490808 DNAH12Q6ZR08 3092 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 CEP290O15078 2479 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 NKRFO15226 690 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 SEPT4O43236 478 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 EIF3JO75822 258 aaKnown RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 FAM13AO94988 1023 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 LYPLA2O95372 231 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 CYBAP13498 195 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 AKR1A1P14550 325 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 ELNP15502 786 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 MTIF2P46199 727 aaKnown RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 QARSP47897 775 aaKnown RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 KCNJ6P48051 423 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 DNM2P50570 870 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 PSMC5P62195 406 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 FKBP3Q00688 224 aaKnown RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 CYP4A11Q02928 519 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 EHHADHQ08426 723 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 ECM1Q16610 540 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 FKBP15Q5T1M5 1219 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 ARMCX2Q7L311 632 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 KCNK18Q7Z418 384 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 CEP63Q96MT8 703 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 SENP7Q9BQF6 1050 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 NUP58Q9BVL2 599 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 NAA15Q9BXJ9 866 aaKnown RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 BHMT2Q9H2M3 363 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 UNC45AQ9H3U1 944 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 ZHX3Q9H4I2 956 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 DBR1Q9UK59 544 aaKnown RBP11.34□□□□□ -0.59
HDAC3-210ENST00000490808 Q9Y3F1 56 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 ITIH6Q6UXX5 1313 aa11.34□□□□□ -0.59
HDAC3-210ENST00000490808 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 FRMD3A2A2Y4 597 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 EML1O00423 815 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 CALUO43852 315 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 TUBB4AP04350 444 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 PSAPP07602 524 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 TGFB3P10600 412 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 SKILP12757 684 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 CCL5P13501 91 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 RPL13P26373 211 aaKnown RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 ABCD1P33897 745 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 ACVR2BQ13705 512 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 ALCAMQ13740 583 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 GIT2Q14161 759 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 CTTNQ14247 550 aaKnown RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 EDRF1Q3B7T1 1238 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 DNTTIP2Q5QJE6 756 aaKnown RBP11.33□□□□□ -0.6
HDAC3-210ENST00000490808 ANKRD40Q6AI12 368 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 IQSEC1Q6DN90 963 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
HDAC3-210ENST00000490808 TTI2Q6NXR4 508 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms