RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 ZNF214Q9UL59 606 aaPredicted RBP5.73□□□□□ -1.49
CSTF1-205ENST00000490539 SF3B6Q9Y3B4 125 aaKnown RBP5.73□□□□□ -1.49
CSTF1-205ENST00000490539 XDHP47989 1333 aa5.73□□□□□ -1.49
CSTF1-205ENST00000490539 DLEC1Q9Y238 1755 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 GLTPD2A6NH11 291 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 PLIN1O60240 522 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 UFL1O94874 794 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 ZGLP1P0C6A0 271 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 ATF4P18848 351 aaPredicted RBP5.72□□□□□ -1.49
CSTF1-205ENST00000490539 BMP8BP34820 402 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 SNX17Q15036 470 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 TDRD10Q5VZ19 366 aaKnown RBP5.72□□□□□ -1.49
CSTF1-205ENST00000490539 HEATR6Q6AI08 1181 aaKnown RBP5.72□□□□□ -1.49
CSTF1-205ENST00000490539 LMBR1LQ6UX01 489 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 LDHAL6AQ6ZMR3 332 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 ADAT2Q7Z6V5 191 aaKnown RBP5.72□□□□□ -1.49
CSTF1-205ENST00000490539 TTLL11Q8NHH1 800 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 SHDQ96IW2 340 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 GREM2Q9H772 168 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 C19orf73Q9NVV2 129 aa5.72□□□□□ -1.49
CSTF1-205ENST00000490539 BRCA1P38398 1863 aaKnown RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 ANKRD31Q8N7Z5 1873 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 RTL9Q8NET4 1388 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 BRCA2P51587 3418 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 C9IYK1 514 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 FKTNO75072 461 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 PPM1BO75688 479 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 NAT2P11245 290 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 CD247P20963 164 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 KIR2DL1P43626 348 aaPredicted RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 KIR2DL2P43627 348 aaPredicted RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 ARID5AQ03989 594 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 NR0B2Q15466 257 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 ZYXQ15942 572 aaKnown RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 TNNI3KQ59H18 835 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 FYB2Q5VWT5 728 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 PNMA8AQ86V59 439 aaPredicted RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 ITPRIPQ8IWB1 547 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 GPC2Q8N158 579 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 CELF1Q92879 486 aaKnown RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 CDADC1Q9BWV3 514 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 RTFDC1Q9BY42 306 aaPredicted RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 CWC22Q9HCG8 908 aaKnown RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 FAM86C1Q9NVL1 165 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 DIS3Q9Y2L1 958 aaKnown RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 R3HCC1Q9Y3T6 440 aaKnown RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 FHOD1Q9Y613 1164 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 RANBP2P49792 3224 aaKnown RBP5.71□□□□□ -1.5
CSTF1-205ENST00000490539 SLX4Q8IY92 1834 aa5.71□□□□□ -1.5
CSTF1-205ENST00000490539 CACNA1GO43497 2377 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 PIEZO1Q92508 2521 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 CASP8AP2Q9UKL3 1982 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 A0A1W2PQH9 124 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 H7C1D1 291 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 FRAT2O75474 233 aaPredicted RBP5.7□□□□□ -1.5
CSTF1-205ENST00000490539 GNAI2P04899 355 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 CSF1RP07333 972 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 NBPF7P0C2Y1 421 aaPredicted RBP5.7□□□□□ -1.5
CSTF1-205ENST00000490539 CASP7P55210 303 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 KIAA2012Q0VF49 1180 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 MLANAQ16655 118 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 AXDND1Q5T1B0 1012 aaPredicted RBP5.7□□□□□ -1.5
CSTF1-205ENST00000490539 DCAF15Q66K64 600 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 CIAPIN1Q6FI81 312 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 OLFM4Q6UX06 510 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 ZNF804AQ7Z570 1209 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 NAT16Q8N8M0 369 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 FCRL2Q96LA5 508 aaPredicted RBP5.7□□□□□ -1.5
CSTF1-205ENST00000490539 SLC6A17Q9H1V8 727 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 BICC1Q9H694 974 aaKnown RBP5.7□□□□□ -1.5
CSTF1-205ENST00000490539 GP6Q9HCN6 339 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 WHRNQ9P202 907 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 TNFRSF10DQ9UBN6 386 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 GPR160Q9UJ42 338 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 HACL1Q9UJ83 578 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 COL11A2P13942 1736 aaPredicted RBP5.7□□□□□ -1.5
CSTF1-205ENST00000490539 KIAA1551Q9HCM1 1747 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 UTYO14607 1347 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 MROH5Q6ZUA9 1318 aa5.7□□□□□ -1.5
CSTF1-205ENST00000490539 CACNA1SQ13698 1873 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 A0A1W2PQ27 194 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 A0A1W2PQ64 194 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 A0A1W2PQC6 194 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 A0A1W2PQD8 194 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 RBAK-RBAKDNI3L0D1 243 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 FZD9O00144 591 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 BCAR3O75815 825 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 TRIM27P14373 513 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 VAV1P15498 845 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 RPS12P25398 132 aaKnown RBP5.69□□□□□ -1.5
CSTF1-205ENST00000490539 MMP14P50281 582 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 GPSM2P81274 684 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 RBM10P98175 930 aaKnown RBP5.69□□□□□ -1.5
CSTF1-205ENST00000490539 FOXO4P98177 505 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 POU4F1Q01851 419 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 NCAPHQ15003 741 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 CAVIN4Q5BKX8 364 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 METTL24Q5JXM2 366 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 C20orf194Q5TEA3 1177 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms