RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 B4GALT6Q9UBX8 382 aa6.43□□□□□ -1.38
SSX2IP-208ENST00000490476 VAV3Q9UKW4 847 aa6.43□□□□□ -1.38
SSX2IP-208ENST00000490476 APOBEC2Q9Y235 224 aaKnown RBP6.43□□□□□ -1.38
SSX2IP-208ENST00000490476 PIEZO1Q92508 2521 aa6.43□□□□□ -1.38
SSX2IP-208ENST00000490476 IGSF1Q8N6C5 1336 aa6.43□□□□□ -1.38
SSX2IP-208ENST00000490476 ZNF644Q9H582 1327 aaPredicted RBP6.43□□□□□ -1.38
SSX2IP-208ENST00000490476 KAT6BQ8WYB5 2073 aa6.43□□□□□ -1.38
SSX2IP-208ENST00000490476 NHSQ6T4R5 1651 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 HFM1A2PYH4 1435 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 BTAF1O14981 1849 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 ARFGEF1Q9Y6D6 1849 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 C22orf46C9J442 243 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 DYRK3O43781 588 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 PPP1R11O60927 126 aaPredicted RBP6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 PDE6AP16499 860 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 KPNA1P52294 538 aaPredicted RBP6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 MAP2K1Q02750 393 aaPredicted RBP6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 HSP90AB2PQ58FF8 381 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 EP400NLQ6ZTU2 488 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 CNTD1Q8N815 330 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 FAM122AQ96E09 287 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 MAP6Q96JE9 813 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 ORAI3Q9BRQ5 295 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 TRIM8Q9BZR9 551 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 CRTAC1Q9NQ79 661 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 TNFRSF10DQ9UBN6 386 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 EBF1Q9UH73 591 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 COA3Q9Y2R0 106 aaPredicted RBP6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 IQGAP3Q86VI3 1631 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 ARHGEF10O15013 1369 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 CCNB3Q8WWL7 1395 aa6.42□□□□□ -1.38
SSX2IP-208ENST00000490476 VCANP13611 3396 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 BRCA1P38398 1863 aaKnown RBP6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 TACR1P25103 407 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 LSSP48449 732 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 JAM2P57087 298 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 ZP2Q05996 745 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 SLC14A2Q15849 920 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 RALGPS1Q5JS13 557 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 ZMYM1Q5SVZ6 1142 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 CEP128Q6ZU80 1094 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 PANK1Q8TE04 598 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 YIPF4Q9BSR8 244 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 PUS7LQ9H0K6 701 aaKnown RBP6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 CDIP1Q9H305 208 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 SLC52A1Q9NWF4 448 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 TRHDEQ9UKU6 1024 aa6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 N4BP2Q86UW6 1770 aaPredicted RBP6.41□□□□□ -1.38
SSX2IP-208ENST00000490476 TRPM1Q7Z4N2 1603 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 ALS2Q96Q42 1657 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 FADS2P1A8MWK0 482 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 H7BY64 318 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 WNT9AO14904 365 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 PRKD3O94806 890 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 MECP2P51608 486 aaKnown RBP6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 HK2P52789 917 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 RTP1P59025 263 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 OCRLQ01968 901 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 SPIRE1Q08AE8 756 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 DUSP4Q13115 394 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 ZNF574Q6ZN55 896 aaPredicted RBP6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 ARHGAP36Q6ZRI8 547 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 PTRH1Q86Y79 214 aaKnown RBP6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 WDR75Q8IWA0 830 aaKnown RBP6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 MISP3Q96FF7 219 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 G6PC3Q9BUM1 346 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 EMC7Q9NPA0 242 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 AASDHPPTQ9NRN7 309 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 OXSMQ9NWU1 459 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 IMPACTQ9P2X3 320 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 ZNF281Q9Y2X9 895 aa6.4□□□□□ -1.38
SSX2IP-208ENST00000490476 PNPLA7Q6ZV29 1317 aa6.4□□□□□ -1.39
SSX2IP-208ENST00000490476 METP08581 1390 aa6.4□□□□□ -1.39
SSX2IP-208ENST00000490476 QRICH2Q9H0J4 1663 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 KIAA1551Q9HCM1 1747 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 TTC28Q96AY4 2481 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 A0A1W2PQJ5 194 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 NKRFO15226 690 aaKnown RBP eCLIP6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 CD8BP10966 210 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 GRIK1P39086 918 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 NEK2P51955 445 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 EPHB1P54762 984 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 KIR3DS1Q14943 382 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 GPR19Q15760 415 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 ANGEL2Q5VTE6 544 aaKnown RBP6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 SLCO6A1Q86UG4 719 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 SLC51AQ86UW1 340 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 LZTR1Q8N653 840 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 PIP4K2CQ8TBX8 421 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 BCL7CQ8WUZ0 217 aaPredicted RBP6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 TSR2Q969E8 191 aaKnown RBP6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 ALPK1Q96QP1 1244 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 EPB41L1Q9H4G0 881 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 SMURF1Q9HCE7 757 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 VTA1Q9NP79 307 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 PRDM7Q9NQW5 492 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 BSDC1Q9NW68 430 aaPredicted RBP6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 SLC5A6Q9Y289 635 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 TAF6LQ9Y6J9 622 aa6.39□□□□□ -1.39
SSX2IP-208ENST00000490476 BRD4O60885 1362 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms