RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PUS7LQ9H0K6 701 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 POMKQ9H5K3 350 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 DDX41Q9UJV9 622 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 ISY1Q9ULR0 285 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 NR2E1Q9Y466 385 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 FSD2A1L4K1 749 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 ENPP3O14638 875 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 TREHO43280 583 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 CT47B1P0C2W7 299 aaPredicted RBP8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 TRIM27P14373 513 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 FAM26DQ5JW98 314 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 BTNL9Q6UXG8 535 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 SEPT14Q6ZU15 432 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 CMTR2Q8IYT2 770 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 RASGRP4Q8TDF6 673 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 LINC01599Q8WXQ3 324 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 ATP6V0A1Q93050 837 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 MPHOSPH6Q99547 160 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 CDCA3Q99618 268 aaPredicted RBP8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 HINFPQ9BQA5 517 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 C16orf70Q9BSU1 422 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 APOL5Q9BWW9 433 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 EPB41L4AQ9HCS5 686 aaPredicted RBP8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 ERVK-5Q9HDB9 667 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 TSHZ2Q9NRE2 1034 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 DNMT3LQ9UJW3 386 aa8.4□□□□□ -1.06
PDLIM1-203ENST00000490391 DENND4AQ7Z401 1863 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 C17orf102A2RUQ5 167 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 MINDY4BA8MYZ0 360 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 MSTNO14793 375 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 FSCN2O14926 492 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 ZIC2O95409 532 aaPredicted RBP8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 HOXB8P17481 243 aaPredicted RBP8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 TECP42680 631 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 RARSP54136 660 aaKnown RBP8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 ERVFC1P60507 584 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 GUCA2AQ02747 115 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 LAMC2Q13753 1193 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 TTBK2Q6IQ55 1244 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 GIMAP6Q6P9H5 292 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 ZDHHC14Q8IZN3 488 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 ZNF444Q8N0Y2 327 aaPredicted RBP8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 ZNF511Q8NB15 262 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 STRBPQ96SI9 672 aaKnown RBP8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 EHMT1Q9H9B1 1298 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 PAG1Q9NWQ8 432 aa8.39□□□□□ -1.07
PDLIM1-203ENST00000490391 LAMA1P25391 3075 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 DCDC2BA2VCK2 349 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 PPFIA4O75335 1185 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 CHRNA1P02708 482 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 SMIM10L2AP0DMW4 78 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 SMIM10L2BP0DMW5 78 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 BMP2P12643 396 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 SDHBP21912 280 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 SLC16A2P36021 539 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 ADAM17P78536 824 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 UBE3AQ05086 875 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 HSDL1Q3SXM5 330 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 MYSM1Q5VVJ2 828 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 RIN2Q8WYP3 895 aaPredicted RBP8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 ITPKCQ96DU7 683 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 NECTIN4Q96NY8 510 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 RNPEPQ9H4A4 650 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 IL1RAPL2Q9NP60 686 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 SH2B1Q9NRF2 756 aaPredicted RBP8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 EVA1BQ9NVM1 165 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 COL20A1Q9P218 1284 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 LIMD1Q9UGP4 676 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 EXOC6BQ9Y2D4 811 aa8.38□□□□□ -1.07
PDLIM1-203ENST00000490391 FREM2Q5SZK8 3169 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 WDR19Q8NEZ3 1342 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 FNDC1Q4ZHG4 1894 aaPredicted RBP8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 B4DLN1 442 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 SP9P0CG40 484 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 TSPY3P0CV98 308 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 TSPY8P0CW00 308 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 GHRP10912 638 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 MS4A1P11836 297 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 TGM1P22735 817 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 NOVP48745 357 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 GATMP50440 423 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 MRPL12P52815 198 aaKnown RBP8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 LPIN1Q14693 890 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 SYDE2Q5VT97 1194 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 ZC3H14Q6PJT7 736 aaKnown RBP8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 RGS22Q8NE09 1264 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 TBC1D5Q92609 795 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 CHAMP1Q96JM3 812 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 RTKNQ9BST9 563 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 ADAM7Q9H2U9 754 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 IL17RBQ9NRM6 502 aa8.37□□□□□ -1.07
PDLIM1-203ENST00000490391 PRR5-ARHGAP8B1AHC4 643 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 H3BRB1 525 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms