RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 TAF2Q6P1X5 1199 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 DTHD1Q6ZMT9 781 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 TNPO1Q92973 898 aaKnown RBP16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 LBHD1Q9BQE6 289 aaPredicted RBP16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 MMTAG2Q9BU76 263 aaKnown RBP16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 OSBPL7Q9BZF2 842 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 NRBP2Q9NSY0 501 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 SCN5AQ14524 2016 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 VWA3AA6NCI4 1184 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 DDX11L8A8MPP1 907 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 LYPLA2O95372 231 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 SELPP16109 830 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 YWHABP31946 246 aaKnown RBP16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 FPGSQ05932 587 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 FOXD4L6Q3SYB3 417 aaPredicted RBP16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 FOXD4L3Q6VB84 417 aaPredicted RBP16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 LRRC8DQ7L1W4 858 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 RPAINQ86UA6 219 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 LINC01465Q8N7H1 131 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 NEK9Q8TD19 979 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 DNAJB3Q8WWF6 145 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 POLR3CQ9BUI4 534 aaPredicted RBP16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 LRWD1Q9UFC0 647 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 CHD9Q3L8U1 2897 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 TET1Q8NFU7 2136 aa16.11■□□□□ 0.17
SRGAP3-208ENST00000490348 RPA1P27694 616 aa16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 MTERF2Q49AM1 385 aa16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 KIAA0319LQ8IZA0 1049 aa16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 TMEM199Q8N511 208 aa16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 CCDC155Q8N6L0 562 aa16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 CHAMP1Q96JM3 812 aa16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 FAM49AQ9H0Q0 323 aaPredicted RBP16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 TUFT1Q9NNX1 390 aa16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 CYP26B1Q9NR63 512 aa16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 COLQQ9Y215 455 aaPredicted RBP16.1■□□□□ 0.17
SRGAP3-208ENST00000490348 SMIM35A0A1B0GVV1 85 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 NBNO60934 754 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 BMP15O95972 392 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 CHRNA1P02708 482 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 CTSHP09668 335 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 ACRP10323 421 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 MARCKSP29966 332 aaPredicted RBP16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 BMP8BP34820 402 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 MGAT3Q09327 533 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 DRP2Q13474 957 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 LRRC71Q8N4P6 559 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 RETREG2Q8NC44 543 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 PIGOQ8TEQ8 1089 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 TFIP11Q9UBB9 837 aaKnown RBP16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 EVPLQ92817 2033 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 IGKV6-21A0A0C4DH24 114 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 DKC1O60832 514 aaKnown RBP eCLIP16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 CAND2O75155 1236 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 CLCN3P51790 818 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 SLC39A14Q15043 492 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 FAM26DQ5JW98 314 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 C9orf50Q5SZB4 431 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 ERMNQ8TAM6 284 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 RAB34Q9BZG1 259 aa16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 UBE2OQ9C0C9 1292 aaKnown RBP16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
SRGAP3-208ENST00000490348 CHD7Q9P2D1 2997 aa16.08■□□□□ 0.17
SRGAP3-208ENST00000490348 SIP14410 1827 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 RSPH10B2B2RC85 870 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 RSPH10BP0C881 870 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 CCT6AP40227 531 aaKnown RBP16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 TBC1D8BQ0IIM8 1120 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 PPIGQ13427 754 aaKnown RBP eCLIP16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 TCTN1Q2MV58 587 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 HAUS3Q68CZ6 603 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 EFCAB12Q6NXP0 572 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 DEFB128Q7Z7B8 93 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 METTL13Q8N6R0 699 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 LINC00301Q8NCQ3 95 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 SNX29Q8TEQ0 813 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 CEP170P1Q96L14 293 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 IL23AQ9NPF7 189 aa16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 MORC2Q9Y6X9 1032 aaPredicted RBP16.08■□□□□ 0.16
SRGAP3-208ENST00000490348 MAGEB2O15479 319 aa16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 MAFO75444 373 aaPredicted RBP16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 CXCL10P02778 98 aa16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 RARRES1P49788 294 aa16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 MRPS6P82932 125 aaKnown RBP16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 DNM1Q05193 864 aaKnown RBP16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 TMEM240Q5SV17 173 aa16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 CLIC6Q96NY7 704 aa16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 DHX33Q9H6R0 707 aaKnown RBP16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 CDHR5Q9HBB8 845 aa16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 ANKEF1Q9NU02 776 aa16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 KIAA1024Q9UPX6 916 aa16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 SRPRBQ9Y5M8 271 aaKnown RBP16.07■□□□□ 0.16
SRGAP3-208ENST00000490348 ARID2Q68CP9 1835 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms