RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 SPATA31A5Q5VU36 1347 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 CCDC171Q6TFL3 1326 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 SPATA31A7Q8IWB4 1347 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 WDR33Q9C0J8 1336 aaKnown RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 A0A0U1RQG5 324 aaPredicted RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 SMTNL1A8MU46 457 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 ADCY5O95622 1261 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 PTMAP06454 111 aaKnown RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 MYL6BP14649 208 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 MX1P20591 662 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 GDF5P43026 501 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 MAGEA10P43363 369 aaPredicted RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 GIPRP48546 466 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 GNAI1P63096 354 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 AUHQ13825 339 aaKnown RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 ANKRD39Q53RE8 183 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 CEP85Q6P2H3 762 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 UNC5AQ6ZN44 842 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 NT5DC4Q86YG4 428 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 FAM169BQ8N8A8 192 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 KCNH5Q8NCM2 988 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 KLHL6Q8WZ60 621 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 PLCD4Q9BRC7 762 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 SRRTQ9BXP5 876 aaKnown RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 PHAXQ9H814 394 aaKnown RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 KCND1Q9NSA2 647 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 ERVK13-1Q9NX77 482 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 SUSD2Q9UGT4 822 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 ZNF214Q9UL59 606 aaPredicted RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 ASAP1Q9ULH1 1129 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 YBX2Q9Y2T7 364 aaKnown RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 MORC2Q9Y6X9 1032 aaPredicted RBP4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 LAMA4Q16363 1823 aa4.05□□□□□ -1.76
CRNKL1-203ENST00000490258 RGPD3A6NKT7 1758 aaPredicted RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 RGPD4Q7Z3J3 1758 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 QSER1Q2KHR3 1735 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 CEMIPQ8WUJ3 1361 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 FITM1A5D6W6 292 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 FADS2P1A8MWK0 482 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 TULP2O00295 520 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 NRDCO43847 1150 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 PRICKLE3O43900 615 aaPredicted RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 USP2O75604 605 aaPredicted RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 IMPDH2P12268 514 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 IL2RBP14784 551 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 GUCY2CP25092 1073 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 BMP8BP34820 402 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 UBE2HP62256 183 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 CBX1P83916 185 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 LMOD3Q0VAK6 560 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 AIMP1Q12904 312 aaKnown RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 CHAF1AQ13111 956 aaPredicted RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 VMACQ2NL98 169 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 C9orf131Q5VYM1 1079 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 CRTC3Q6UUV7 619 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 SLCO6A1Q86UG4 719 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 ZNF654Q8IZM8 581 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 LILRA2Q8N149 483 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 ANKS4BQ8N8V4 417 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 C19orf47Q8N9M1 422 aaKnown RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 OTUD7AQ8TE49 926 aaPredicted RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 IPO4Q8TEX9 1081 aaKnown RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 RAPGEF4Q8WZA2 1011 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 UBXN4Q92575 508 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 SIGLEC10Q96LC7 697 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 ZNF552Q9H707 407 aaPredicted RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 TTC12Q9H892 705 aaPredicted RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 CHST7Q9NS84 486 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 GFOD1Q9NXC2 390 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 CHPF2Q9P2E5 772 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 CGNQ9P2M7 1197 aaKnown RBP4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 STAP2Q9UGK3 403 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 TCFL5Q9UL49 500 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 PYCARDQ9ULZ3 195 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 IRAK3Q9Y616 596 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 DLEC1Q9Y238 1755 aa4.04□□□□□ -1.76
CRNKL1-203ENST00000490258 ADCY9O60503 1353 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 CHD4Q14839 1912 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 LRP5O75197 1615 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 CDK5RAP2Q96SN8 1893 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 ELP1O95163 1332 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 PTPRCP08575 1304 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 PCDH11XQ9BZA7 1347 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 PCDH11YQ9BZA8 1340 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 CCDC66A2RUB6 948 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 GOLGA6L6A8MZA4 724 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 U2AF2P26368 475 aaKnown RBP eCLIP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 KIR2DL1P43626 348 aaPredicted RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 KIR2DL2P43627 348 aaPredicted RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 GALK1P51570 392 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 ADAM17P78536 824 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 ITPK1Q13572 414 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 COL9A2Q14055 689 aaPredicted RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 KIR3DS1Q14943 382 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 SF3A1Q15459 793 aaKnown RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 TERF2Q15554 542 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 TWISTNBQ3B726 338 aaPredicted RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 C1orf141Q5JVX7 400 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 TDRD10Q5VZ19 366 aaKnown RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 DCAF15Q66K64 600 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms