RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 PRR16Q569H4 304 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 ZNF484Q5JVG2 852 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 FAM160B1Q5W0V3 765 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 MOXD1Q6UVY6 613 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 TRIM22Q8IYM9 498 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 LINC01599Q8WXQ3 324 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 SLC5A5Q92911 643 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 CLP1Q92989 425 aaKnown RBP11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 ZNF689Q96CS4 500 aaPredicted RBP11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 C17orf80Q9BSJ5 609 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 C22orf23Q9BZE7 217 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 ZNF302Q9NR11 478 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 PDRG1Q9NUG6 133 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 PCDHA4Q9UN74 947 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 COG5Q9UP83 839 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 PCDHA10Q9Y5I2 948 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 C5orf67F2Z3F1 127 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 H3BNC9 293 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 MSH4O15457 936 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 PFKFB2O60825 505 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 PSMD10O75832 226 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 DGKIO75912 1065 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 C22orf31O95567 290 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 NLRP5P59047 1200 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 IGBP1P78318 339 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 Q4G0T1 1027 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 EPC2Q52LR7 807 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 FAM117BQ6P1L5 589 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 PDXDC2PQ6P474 469 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 HS6ST3Q8IZP7 471 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 LINC01465Q8N7H1 131 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 FTHL17Q9BXU8 183 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 FAM49AQ9H0Q0 323 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 TMX1Q9H3N1 280 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 PADI3Q9ULW8 664 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 TRPV2Q9Y5S1 764 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 SIP14410 1827 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 REV3LO60673 3130 aa11.02□□□□□ -0.65
TMEM39A-210ENST00000490099 MYO7AQ13402 2215 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 BACH1O14867 736 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 ATMINO43313 823 aaPredicted RBP11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 ZNF862O60290 1169 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 STBD1O95210 358 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 CTDNEP1O95476 244 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 RB1P06400 928 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 PSAPP07602 524 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 CD52P31358 61 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 TFF2Q03403 129 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 SCRN1Q12765 414 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 AAK1Q2M2I8 961 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 TMEM192Q8IY95 271 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 BLIDQ8IZY5 108 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 RDM1Q8NG50 284 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 TBCKQ8TEA7 893 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 GDPD5Q8WTR4 605 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 MRPL38Q96DV4 380 aaKnown RBP11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 AIFM3Q96NN9 605 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 YME1L1Q96TA2 773 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 PHF20Q9BVI0 1012 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 CDHR5Q9HBB8 845 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 ERVK-5Q9HDB9 667 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 TPCN1Q9ULQ1 816 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 STK36Q9NRP7 1315 aa11.01□□□□□ -0.65
TMEM39A-210ENST00000490099 SPTBN5Q9NRC6 3674 aaKnown RBP11□□□□□ -0.65
TMEM39A-210ENST00000490099 WDR64B1ANS9 1081 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 CPLX1O14810 134 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 MAGEB2O15479 319 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 GPR32O75388 356 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 UPP2O95045 317 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 SFNP31947 248 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 BMPR1AP36894 532 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 FAM189BP81408 668 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 TARBP2Q15633 366 aaKnown RBP11□□□□□ -0.65
TMEM39A-210ENST00000490099 CPLX2Q6PUV4 134 aaKnown RBP11□□□□□ -0.65
TMEM39A-210ENST00000490099 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 FBXO22Q8NEZ5 403 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 ETNPPLQ8TBG4 499 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 ADAMTS19Q8TE59 1207 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 TMEM40Q8WWA1 233 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 UIMC1Q96RL1 719 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 CEP89Q96ST8 783 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 NIFKQ9BYG3 293 aaKnown RBP11□□□□□ -0.65
TMEM39A-210ENST00000490099 DISC1Q9NRI5 854 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 GABBR1Q9UBS5 961 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 MTUS1Q9ULD2 1270 aa11□□□□□ -0.65
TMEM39A-210ENST00000490099 M0QZ92 97 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 STK25O00506 426 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 FDPSP14324 419 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 CRYBB1P53674 252 aaPredicted RBP10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 TMEM62Q0P6H9 643 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 PPP4R3AQ6IN85 833 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 NPAS4Q8IUM7 802 aa10.99□□□□□ -0.65
TMEM39A-210ENST00000490099 CMTR2Q8IYT2 770 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms