RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ADAM2Q99965 735 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 MXRA8Q9BRK3 442 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 SDF4Q9BRK5 362 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 CDHR5Q9HBB8 845 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 TMEM260Q9NX78 707 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 NOC2LQ9Y3T9 749 aaKnown RBP15.96■□□□□ 0.15
VARS-227ENST00000489979 MYO15AQ9UKN7 3530 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 NFASCO94856 1347 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 ZFHX2Q9C0A1 2572 aaPredicted RBP15.95■□□□□ 0.14
VARS-227ENST00000489979 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 DENND3A2RUS2 1198 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 ARP10275 920 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 KLRC1P26715 233 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 PDE4AP27815 886 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 APOBRQ0VD83 1088 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 PTPN21Q16825 1174 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 PLPP4Q5VZY2 271 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 RAB11FIP4Q86YS3 637 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 CCDC82Q8N4S0 544 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 APOL5Q9BWW9 433 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 S1PR5Q9H228 398 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 RGS18Q9NS28 235 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 C1orf112Q9NSG2 853 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 TYW1Q9NV66 732 aaKnown RBP15.95■□□□□ 0.14
VARS-227ENST00000489979 MYO10Q9HD67 2058 aa15.95■□□□□ 0.14
VARS-227ENST00000489979 CCDC69A6NI79 296 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 C9IYK1 514 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 SH2B2O14492 632 aaPredicted RBP15.94■□□□□ 0.14
VARS-227ENST00000489979 SGSM2O43147 1006 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 PRC1O43663 620 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 SP100P23497 879 aaPredicted RBP15.94■□□□□ 0.14
VARS-227ENST00000489979 TECP42680 631 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 ITGB3BPQ13352 177 aaPredicted RBP15.94■□□□□ 0.14
VARS-227ENST00000489979 KCNC3Q14003 757 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 PDE12Q6L8Q7 609 aaKnown RBP15.94■□□□□ 0.14
VARS-227ENST00000489979 ANKRD54Q6NXT1 300 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 SYCE2Q6PIF2 218 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 TMEM184AQ6ZMB5 413 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 SLC24A5Q71RS6 500 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 HEATR3Q7Z4Q2 680 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 KIAA0319LQ8IZA0 1049 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 EXOC6Q8TAG9 804 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 TMEM40Q8WWA1 233 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 IRF2BPLQ9H1B7 796 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 CWH43Q9H720 699 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 AGO4Q9HCK5 861 aaKnown RBP15.94■□□□□ 0.14
VARS-227ENST00000489979 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
VARS-227ENST00000489979 ST3GAL5Q9UNP4 418 aa15.94■□□□□ 0.14
VARS-227ENST00000489979 RBM8AQ9Y5S9 174 aaKnown RBP15.94■□□□□ 0.14
VARS-227ENST00000489979 ATG7O95352 703 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 PDGFBP01127 241 aaPredicted RBP15.93■□□□□ 0.14
VARS-227ENST00000489979 SRGAP2BP0DMP2 458 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 FGFR1P11362 822 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 SLC26A2P50443 739 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 LLGL2Q6P1M3 1020 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 FAM43BQ6ZT52 329 aaPredicted RBP15.93■□□□□ 0.14
VARS-227ENST00000489979 ZBTB33Q86T24 672 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 TMTC2Q8N394 836 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 MAP4K1Q92918 833 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 PGBD1Q96JS3 809 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 PPP1R16BQ96T49 567 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 MTA3Q9BTC8 594 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 ATP6V0A4Q9HBG4 840 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 PLXNA3P51805 1871 aa15.93■□□□□ 0.14
VARS-227ENST00000489979 PTPRZ1P23471 2315 aaPredicted RBP15.93■□□□□ 0.14
VARS-227ENST00000489979 IGKV6D-21A0A0A0MT36 114 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 HIDE1A8MVS5 230 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 H0Y858 1186 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 DDX39AO00148 427 aaKnown RBP15.92■□□□□ 0.14
VARS-227ENST00000489979 BACH1O14867 736 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 GPR182O15218 404 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 HBP1O60381 514 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 CALM1P0DP23 149 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 CALM2P0DP24 149 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 CALM3P0DP25 149 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 LAG3P18627 525 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 MCM5P33992 734 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 COL9A3Q14050 684 aaPredicted RBP15.92■□□□□ 0.14
VARS-227ENST00000489979 CEP55Q53EZ4 464 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 ODR4Q5SWX8 454 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 TMTC3Q6ZXV5 915 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 RASGRP4Q8TDF6 673 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 MRPS27Q92552 414 aaKnown RBP15.92■□□□□ 0.14
VARS-227ENST00000489979 RIPOR3Q96MK2 946 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 TCF25Q9BQ70 676 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 ENTPD7Q9NQZ7 604 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 TMEM161AQ9NX61 479 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 PUF60Q9UHX1 559 aaKnown RBP15.92■□□□□ 0.14
VARS-227ENST00000489979 LZTS1Q9Y250 596 aa15.92■□□□□ 0.14
VARS-227ENST00000489979 DMDP11532 3685 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 CCNE2O96020 404 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 FAM189BP81408 668 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 PLCB3Q01970 1234 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 KIZQ2M2Z5 673 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 FAM160B1Q5W0V3 765 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 ABHD15Q6UXT9 468 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 FAM228AQ86W67 206 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 TMEM87BQ96K49 555 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 OSMRQ99650 979 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 TSHZ2Q9NRE2 1034 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms