RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 STK11IPQ8N1F8 1099 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 LRRC43Q8N309 656 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 ASAP3Q8TDY4 903 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 PIGOQ8TEQ8 1089 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF653Q96CK0 615 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 COG3Q96JB2 828 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 HAPLN3Q96S86 360 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 SETDB2Q96T68 719 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 MPHOSPH6Q99547 160 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 SAP130Q9H0E3 1048 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 CCDC8Q9H0W5 538 aaPredicted RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 LUC7LQ9NQ29 371 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 TRPV5Q9NQA5 729 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 FAM114A2Q9NRY5 505 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 HELLSQ9NRZ9 838 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 ABCF3Q9NUQ8 709 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 RMND1Q9NWS8 449 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 UTP6Q9NYH9 597 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 TMOD4Q9NZQ9 345 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 NKX1-2Q9UD57 310 aaPredicted RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 RWDD2AQ9UIY3 292 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 BARX2Q9UMQ3 279 aaPredicted RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 RPL26L1Q9UNX3 145 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 TFR2Q9UP52 801 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 MAPK8IP1Q9UQF2 711 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 LRCH1Q9Y2L9 728 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 TMEM98Q9Y2Y6 226 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 DAAM1Q9Y4D1 1078 aa5.18□□□□□ -1.58
SNRNP40-206ENST00000489853 EIF4E1BA6NMX2 242 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 A8MUI8 341 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 RNF223E7ERA6 249 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 H7C1D1 291 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 O00370 1275 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SNX3O60493 162 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SUN1O94901 812 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CHGBP05060 677 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MMEP08473 750 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 TPBGLP0DKB5 382 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MYBL1P10243 752 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CCNB1P14635 433 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 VCAM1P19320 739 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MPSTP25325 297 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MMP13P45452 471 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 PDE6CP51160 858 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CACNA2D1P54289 1103 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MCCD1P59942 119 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 TNNC1P63316 161 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SULT2A1Q06520 285 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MCL1Q07820 350 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 EIF4A2Q14240 407 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 UAP1Q16222 522 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 EAPPQ56P03 285 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 WASHC2DQ5SRD0 308 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 AKNAD1Q5T1N1 836 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MFSD4BQ5TF39 518 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 RASIP1Q5U651 963 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 FOXB2Q5VYV0 432 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 GALNT17Q6IS24 598 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 NFRKBQ6P4R8 1299 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 GGT6Q6P531 493 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF507Q8TCN5 953 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SREK1Q8WXA9 508 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 HIC2Q96JB3 615 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CORO1BQ9BR76 489 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SPATA16Q9BXB7 569 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 TLR10Q9BXR5 811 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SH2D4AQ9H788 454 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 RXFP1Q9HBX9 757 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CCDC87Q9NVE4 849 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 TAB2Q9NYJ8 693 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CYP39A1Q9NYL5 469 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 FBXO2Q9UK22 296 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 STK38LQ9Y2H1 464 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 ATP8A1Q9Y2Q0 1164 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SH3GLB1Q9Y371 365 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 USP15Q9Y4E8 981 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 PCDHA13Q9Y5I0 950 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 SRPRBQ9Y5M8 271 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 A2ML1A8K2U0 1454 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MST1RQ04912 1400 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 ESYT3A0FGR9 886 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 LGALS16A8MUM7 142 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CETN3O15182 167 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 PJA2O43164 708 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 PEX11AO75192 247 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 LCA5LO95447 670 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 OAS1P00973 400 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CHN1P15882 459 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CYP11B2P19099 503 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 VAMP1P23763 118 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 DNM2P50570 870 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 OCRLQ01968 901 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CCDC15Q0P6D6 951 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 TEFQ10587 303 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 BTG3Q14201 252 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 MAP7Q14244 749 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 KPNB1Q14974 876 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 CNPY1Q3B7I2 92 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 KRT71Q3SY84 523 aa5.17□□□□□ -1.58
SNRNP40-206ENST00000489853 TBCELQ5QJ74 424 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms