RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	IFIH1	Q9BYX4	1025 aa	Known RBP	12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	ZNF576	Q9H609	170 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	SLC28A3	Q9HAS3	691 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	VAV3	Q9UKW4	847 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	CDY2A	Q9Y6F7	541 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	DOCK5	Q9H7D0	1870 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	ZNF862	O60290	1169 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	NEMF	O60524	1076 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	DKC1	O60832	514 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	C22orf31	O95567	290 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	AMH	P03971	560 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	GHR	P10912	638 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	PSMC5	P62195	406 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	TMEM62	Q0P6H9	643 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	UGCG	Q16739	394 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	TCTN1	Q2MV58	587 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	XKR3	Q5GH77	459 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	NOSTRIN	Q8IVI9	506 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	USP38	Q8NB14	1042 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	GUCD1	Q96NT3	240 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	ZBED2	Q9BTP6	218 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	YBX2	Q9Y2T7	364 aa	Known RBP	12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	TRPV2	Q9Y5S1	764 aa		12.46	□□□□□ -0.41
GGA1-222	ENST00000489772	CDH23	Q9H251	3354 aa		12.46	□□□□□ -0.42
GGA1-222	ENST00000489772	EML1	O00423	815 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	TLL1	O43897	1013 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	ATP2B1	P20020	1258 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	TMOD1	P28289	359 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	QARS	P47897	775 aa	Known RBP	12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	DEFB103A	P81534	67 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	LPIN1	Q14693	890 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	FBXO47	Q5MNV8	452 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	PPP2R2D	Q66LE6	453 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	TSHZ1	Q6ZSZ6	1077 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	KIAA0319L	Q8IZA0	1049 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	BANK1	Q8NDB2	785 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	CDX2	Q99626	313 aa	Predicted RBP	12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	NIFK	Q9BYG3	293 aa	Known RBP	12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	CELF4	Q9BZC1	486 aa	Known RBP	12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	OSBPL7	Q9BZF2	842 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	NKX2-4	Q9H2Z4	354 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	PCDHA12	Q9UN75	941 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	GINS2	Q9Y248	185 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	STXBP5L	Q9Y2K9	1186 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	SQOR	Q9Y6N5	450 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	TANC1	Q9C0D5	1861 aa		12.45	□□□□□ -0.42
GGA1-222	ENST00000489772	DDX11L8	A8MPP1	907 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	GJB5	O95377	273 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	P4HB	P07237	508 aa	Known RBP	12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	CA3	P07451	260 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	MYOG	P15173	224 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	MCM7	P33993	719 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	TBC1D8B	Q0IIM8	1120 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	ORC2	Q13416	577 aa	Predicted RBP	12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	GRIN2C	Q14957	1233 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	EPHA7	Q15375	998 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	NCAPH2	Q6IBW4	605 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	EFCAB12	Q6NXP0	572 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	ZNF710	Q8N1W2	664 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	MAP7D2	Q96T17	732 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	TTC12	Q9H892	705 aa	Predicted RBP	12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	SUGCT	Q9HAC7	445 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	NOL7	Q9UMY1	257 aa	Known RBP	12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	KDM3A	Q9Y4C1	1321 aa		12.44	□□□□□ -0.42
GGA1-222	ENST00000489772	WNT7A	O00755	349 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	U2AF2	P26368	475 aa	Known RBP eCLIP	12.43	□□□□□ -0.42	4e-7	■■■□□ 17.3
GGA1-222	ENST00000489772	GJB2	P29033	226 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	CD52	P31358	61 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	TXK	P42681	527 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	TRAPPC10	P48553	1259 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	PAK2	Q13177	524 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	MYOCD	Q8IZQ8	938 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	MTMR9	Q96QG7	549 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	RAD9A	Q99638	391 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	FTHL17	Q9BXU8	183 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	AGO3	Q9H9G7	860 aa	Known RBP	12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	SMC3	Q9UQE7	1217 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	AKT3	Q9Y243	479 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.43	□□□□□ -0.42
GGA1-222	ENST00000489772		H3BQV1	296 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	RBAK-RBAKDN	I3L0D1	243 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	STBD1	O95210	358 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	FOSL2	P15408	326 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	CLCN3	P51790	818 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	CRYBB1	P53674	252 aa	Predicted RBP	12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	SPIRE1	Q08AE8	756 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	TARBP2	Q15633	366 aa	Known RBP	12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	ZNF174	Q15697	407 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	KIZ	Q2M2Z5	673 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	MTERF2	Q49AM1	385 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	TTC38	Q5R3I4	469 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	ODR4	Q5SWX8	454 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	MCTP1	Q6DN14	999 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	FAM117B	Q6P1L5	589 aa		12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.43	□□□□□ -0.42
GGA1-222	ENST00000489772	ANO5	Q75V66	913 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms