RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 PSMC5P62195 406 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 EPHA7Q15375 998 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 Q7L0L9 218 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 RSPH3Q86UC2 560 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 METTL13Q8N6R0 699 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 DBF4BQ8NFT6 615 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 ZNF668Q96K58 619 aaPredicted RBP13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 PCDHA12Q9UN75 941 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 GINS2Q9Y248 185 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 A0A087WWV3 80 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 SMIM35A0A1B0GVV1 85 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 ZBTB39O15060 712 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 VTNP04004 478 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 ACTN1P12814 892 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 TECP42680 631 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 QARSP47897 775 aaKnown RBP13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 TRAPPC10P48553 1259 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 RABGGTBP53611 331 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 NPEPPSP55786 919 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 DEFB103AP81534 67 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 DRP2Q13474 957 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 LPIN1Q14693 890 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 XKR3Q5GH77 459 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 FAM26DQ5JW98 314 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 CNKSR3Q6P9H4 555 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 ANO5Q75V66 913 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 KIAA0319LQ8IZA0 1049 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 C4orf32Q8N8J7 132 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 TNPO1Q92973 898 aaKnown RBP13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 EIF2AK1Q9BQI3 630 aaKnown RBP13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 NRBP2Q9NSY0 501 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 TRPV2Q9Y5S1 764 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 SLC4A7Q9Y6M7 1214 aa13.76□□□□□ -0.21
SMARCD3-213ENST00000489503 P4HBP07237 508 aaKnown RBP13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 SYT1P21579 422 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 WDR5P61964 334 aaKnown RBP13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 TBC1D8BQ0IIM8 1120 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 PTGDRQ13258 359 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 ORC2Q13416 577 aaPredicted RBP13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 TARBP2Q15633 366 aaKnown RBP13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 PLEKHG4Q58EX7 1191 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 FBXO47Q5MNV8 452 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 RPAINQ86UA6 219 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 TPH2Q8IWU9 490 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 LINC01465Q8N7H1 131 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 INTS4Q96HW7 963 aaKnown RBP13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 CEP89Q96ST8 783 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 MTIF3Q9H2K0 278 aaKnown RBP13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 AGO3Q9H9G7 860 aaKnown RBP13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 SUGCTQ9HAC7 445 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 CDHR5Q9HBB8 845 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 CEP131Q9UPN4 1083 aa13.75□□□□□ -0.21
SMARCD3-213ENST00000489503 PP2D1A8MPX8 630 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 MED24O75448 989 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 PARNO95453 639 aaKnown RBP13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 MYOGP15173 224 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 ATP2A2P16615 1042 aaKnown RBP13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 CD52P31358 61 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 IL17AQ16552 155 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 KIZQ2M2Z5 673 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 TMEM266Q2M3C6 531 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 EFCAB12Q6NXP0 572 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 FAM173BQ6P4H8 233 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 TMEM40Q8WWA1 233 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 FAM161BQ96MY7 647 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 OSMRQ99650 979 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 NIFKQ9BYG3 293 aaKnown RBP13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 PBX4Q9BYU1 374 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 IFIH1Q9BYX4 1025 aaKnown RBP13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 CELF4Q9BZC1 486 aaKnown RBP13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 MTMR6Q9Y217 621 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 AKT3Q9Y243 479 aa13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 YBX2Q9Y2T7 364 aaKnown RBP13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 LAMA2P24043 3122 aaKnown RBP13.74□□□□□ -0.21
SMARCD3-213ENST00000489503 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 M0QZ92 97 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 BAIAP3O94812 1187 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 SLITRK3O94933 977 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 PDCP20941 246 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 DNAJB2P25686 324 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 YWHABP31946 246 aaKnown RBP13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 KCNJ6P48051 423 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 SMAD3P84022 425 aaKnown RBP13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 RESTQ13127 1097 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 RILPL1Q5EBL4 403 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 FOXD4L5Q5VV16 416 aaPredicted RBP13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 IER5Q5VY09 327 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 FAM117BQ6P1L5 589 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 C4orf19Q8IY42 314 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 FOXD4L4Q8WXT5 416 aaPredicted RBP13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 SEPT8Q92599 483 aa13.73□□□□□ -0.21
SMARCD3-213ENST00000489503 CEP170P1Q96L14 293 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms