RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
SFXN3-207ENST00000489434 NRIP1P48552 1158 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 UBE3AQ05086 875 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 CAMK1Q14012 370 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 KRT32Q14532 448 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 TMEM266Q2M3C6 531 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 PLA2G4DQ86XP0 818 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 MICAL1Q8TDZ2 1067 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 CCDC12Q8WUD4 166 aaPredicted RBP13.56□□□□□ -0.24
SFXN3-207ENST00000489434 POF1BQ8WVV4 589 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 PGBD1Q96JS3 809 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 MFSD14AQ96MC6 490 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 TLE6Q9H808 572 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 ZNF302Q9NR11 478 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 NAP1L2Q9ULW6 460 aaPredicted RBP13.56□□□□□ -0.24
SFXN3-207ENST00000489434 IGKV6D-21A0A0A0MT36 114 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 GOLGA8AA7E2F4 631 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 GOLGA8BA8MQT2 603 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 IPO5O00410 1097 aaKnown RBP13.55□□□□□ -0.24
SFXN3-207ENST00000489434 LINC01565O15544 149 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 PPFIA3O75145 1194 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 EYA4O95677 639 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 CCNE2O96020 404 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 HMGB1P09429 215 aaKnown RBP13.55□□□□□ -0.24
SFXN3-207ENST00000489434 RCAN1P53805 252 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 COL9A3Q14050 684 aaPredicted RBP13.55□□□□□ -0.24
SFXN3-207ENST00000489434 HERC4Q5GLZ8 1057 aaPredicted RBP13.55□□□□□ -0.24
SFXN3-207ENST00000489434 TYW1BQ6NUM6 668 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 ABHD15Q6UXT9 468 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 SLC24A5Q71RS6 500 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 RNF135Q8IUD6 432 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 KIAA0319LQ8IZA0 1049 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 ADAM2Q99965 735 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 TMX1Q9H3N1 280 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 TBC1D22BQ9NU19 505 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 MUTYHQ9UIF7 546 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 KIAA1671Q9BY89 1806 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 WDFY4Q6ZS81 3184 aa13.55□□□□□ -0.24
SFXN3-207ENST00000489434 KLF18A0A0U1RQI7 1052 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 TBKBP1A7MCY6 615 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 SRGAP2BP0DMP2 458 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 DNAJB1P25685 340 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 CRYBB1P53674 252 aaPredicted RBP13.54□□□□□ -0.24
SFXN3-207ENST00000489434 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
SFXN3-207ENST00000489434 FUT2Q10981 343 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 COASYQ13057 564 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 JAKMIP3Q5VZ66 844 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 PDE12Q6L8Q7 609 aaKnown RBP13.54□□□□□ -0.24
SFXN3-207ENST00000489434 SWSAP1Q6NVH7 229 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 RBM23Q86U06 439 aaKnown RBP13.54□□□□□ -0.24
SFXN3-207ENST00000489434 THNSL1Q8IYQ7 743 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 REXO1Q8N1G1 1221 aaKnown RBP13.54□□□□□ -0.24
SFXN3-207ENST00000489434 METTL13Q8N6R0 699 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 SMRP1Q8NCR6 262 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 MSLNLQ96KJ4 702 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 ATP6V0A4Q9HBG4 840 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 C6orf50Q9HD87 102 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 ERVK-5Q9HDB9 667 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 RGS18Q9NS28 235 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 TMEM260Q9NX78 707 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 BRPF3Q9ULD4 1205 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 ST3GAL5Q9UNP4 418 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 CEP131Q9UPN4 1083 aa13.54□□□□□ -0.24
SFXN3-207ENST00000489434 NOC2LQ9Y3T9 749 aaKnown RBP13.54□□□□□ -0.24
SFXN3-207ENST00000489434 ZNF318Q5VUA4 2279 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 FAM86B1E9PN63 330 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 CYP3A4P08684 503 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 FAM86B2P0C5J1 330 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 GATMP50440 423 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 EXOSC10Q01780 885 aaKnown RBP13.53□□□□□ -0.24
SFXN3-207ENST00000489434 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 ZNF746Q6NUN9 644 aaPredicted RBP13.53□□□□□ -0.24
SFXN3-207ENST00000489434 HFE2Q6ZVN8 426 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 ADGRD2Q7Z7M1 963 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 CCDC60Q8IWA6 550 aaPredicted RBP13.53□□□□□ -0.24
SFXN3-207ENST00000489434 SMAP1Q8IYB5 467 aaPredicted RBP13.53□□□□□ -0.24
SFXN3-207ENST00000489434 ZNF710Q8N1W2 664 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
SFXN3-207ENST00000489434 FAM167AQ96KS9 214 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 MAP7D2Q96T17 732 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 CDCA3Q99618 268 aaPredicted RBP13.53□□□□□ -0.24
SFXN3-207ENST00000489434 TLR9Q9NR96 1032 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 PUF60Q9UHX1 559 aaKnown RBP13.53□□□□□ -0.24
SFXN3-207ENST00000489434 ZDBF2Q9HCK1 2354 aa13.53□□□□□ -0.24
SFXN3-207ENST00000489434 C9IYK1 514 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 MAGEB2O15479 319 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 HOXA2O43364 376 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 FGF18O76093 207 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 PSAPP07602 524 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 LAG3P18627 525 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 TMOD1P28289 359 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 GNA11P29992 359 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 CLK2P49760 499 aaKnown RBP13.52□□□□□ -0.25
SFXN3-207ENST00000489434 METAP2P50579 478 aaKnown RBP eCLIP13.52□□□□□ -0.25
SFXN3-207ENST00000489434 AKAP17AQ02040 695 aaKnown RBP13.52□□□□□ -0.25
SFXN3-207ENST00000489434 PKN1Q16512 942 aa13.52□□□□□ -0.25
SFXN3-207ENST00000489434 PFKFB3Q16875 520 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms